Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
CBX6O95503 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX6O95503 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX6O95503 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.25■□□□□ 0.35
CBX6O95503 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CBX6O95503 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX6O95503 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CBX6O95503 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX6O95503 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX6O95503 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.25■□□□□ 0.35
CBX6O95503 MIR3180-5-201ENST00000583743 153 ntBASIC17.25■□□□□ 0.35
CBX6O95503 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX6O95503 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.25■□□□□ 0.35
CBX6O95503 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX6O95503 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX6O95503 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CBX6O95503 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CBX6O95503 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.24■□□□□ 0.35
CBX6O95503 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX6O95503 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CBX6O95503 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX6O95503 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX6O95503 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX6O95503 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX6O95503 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
CBX6O95503 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX6O95503 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.24■□□□□ 0.35
CBX6O95503 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX6O95503 NPAP1P7-201ENST00000613027 823 ntBASIC17.24■□□□□ 0.35
CBX6O95503 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.24■□□□□ 0.35
CBX6O95503 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CBX6O95503 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CBX6O95503 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CBX6O95503 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.24■□□□□ 0.35
CBX6O95503 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX6O95503 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.23■□□□□ 0.35
CBX6O95503 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CBX6O95503 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CBX6O95503 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CBX6O95503 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX6O95503 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.23■□□□□ 0.35
CBX6O95503 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.23■□□□□ 0.35
CBX6O95503 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 AC246785.2-201ENST00000432512 513 ntBASIC17.23■□□□□ 0.35
CBX6O95503 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.23■□□□□ 0.35
CBX6O95503 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.23■□□□□ 0.35
CBX6O95503 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CBX6O95503 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CBX6O95503 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX6O95503 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX6O95503 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms