Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.47□□□□□ -0.09
ABCA1O95477 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.47□□□□□ -0.09
ABCA1O95477 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 ACTG1P14-201ENST00000446382 1122 ntBASIC14.47□□□□□ -0.09
ABCA1O95477 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 MIR4751-201ENST00000578027 74 ntBASIC14.47□□□□□ -0.09
ABCA1O95477 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
ABCA1O95477 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.47□□□□□ -0.09
ABCA1O95477 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.47□□□□□ -0.09
ABCA1O95477 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 NFIC-211ENST00000641145 8399 ntBASIC14.47□□□□□ -0.09
ABCA1O95477 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.47□□□□□ -0.09
ABCA1O95477 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCA1O95477 SPDYE21P-201ENST00000413323 827 ntBASIC14.46□□□□□ -0.09
ABCA1O95477 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.46□□□□□ -0.09
ABCA1O95477 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCA1O95477 AC008667.4-201ENST00000607370 168 ntBASIC14.46□□□□□ -0.09
ABCA1O95477 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.46□□□□□ -0.09
ABCA1O95477 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.46□□□□□ -0.09
ABCA1O95477 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ABCA1O95477 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 OR6D1P-203ENST00000641209 4860 ntBASIC14.46□□□□□ -0.09
ABCA1O95477 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ABCA1O95477 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
ABCA1O95477 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
ABCA1O95477 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ABCA1O95477 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCA1O95477 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ABCA1O95477 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
ABCA1O95477 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCA1O95477 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 RHOQP3-201ENST00000437982 621 ntBASIC14.46□□□□□ -0.09
ABCA1O95477 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.46□□□□□ -0.09
ABCA1O95477 IGHV3-65-201ENST00000523210 341 ntBASIC14.46□□□□□ -0.09
ABCA1O95477 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.46□□□□□ -0.09
ABCA1O95477 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.46□□□□□ -0.09
ABCA1O95477 AL805961.1-202ENST00000641562 540 ntBASIC14.46□□□□□ -0.09
ABCA1O95477 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ABCA1O95477 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCA1O95477 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
ABCA1O95477 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ABCA1O95477 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ABCA1O95477 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
ABCA1O95477 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.46□□□□□ -0.1
ABCA1O95477 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ABCA1O95477 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ABCA1O95477 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
ABCA1O95477 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.46□□□□□ -0.1
ABCA1O95477 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.45□□□□□ -0.1
ABCA1O95477 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 AC068880.1-201ENST00000507289 2297 ntBASIC14.45□□□□□ -0.1
ABCA1O95477 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.45□□□□□ -0.1
ABCA1O95477 AC023141.5-201ENST00000458585 616 ntBASIC14.45□□□□□ -0.1
ABCA1O95477 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCA1O95477 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.45□□□□□ -0.1
ABCA1O95477 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.45□□□□□ -0.1
ABCA1O95477 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.45□□□□□ -0.1
ABCA1O95477 AC132938.5-201ENST00000624980 1813 ntBASIC14.45□□□□□ -0.1
ABCA1O95477 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ABCA1O95477 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms