Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.5■□□□□ 0.55
CSPG5O95196 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.5■□□□□ 0.55
CSPG5O95196 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSPG5O95196 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.5■□□□□ 0.55
CSPG5O95196 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSPG5O95196 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSPG5O95196 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CSPG5O95196 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSPG5O95196 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.5■□□□□ 0.55
CSPG5O95196 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CSPG5O95196 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.5■□□□□ 0.55
CSPG5O95196 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.5■□□□□ 0.55
CSPG5O95196 FAM86GP-201ENST00000448322 971 ntBASIC18.5■□□□□ 0.55
CSPG5O95196 CXCL1P1-201ENST00000502804 216 ntBASIC18.5■□□□□ 0.55
CSPG5O95196 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
CSPG5O95196 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.5■□□□□ 0.55
CSPG5O95196 AC022145.2-201ENST00000598203 171 ntBASIC18.5■□□□□ 0.55
CSPG5O95196 AL096865.1-201ENST00000606796 927 ntBASIC18.5■□□□□ 0.55
CSPG5O95196 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CSPG5O95196 AC135776.1-201ENST00000319817 2481 ntBASIC18.5■□□□□ 0.55
CSPG5O95196 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CSPG5O95196 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSPG5O95196 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSPG5O95196 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.5■□□□□ 0.55
CSPG5O95196 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.5■□□□□ 0.55
CSPG5O95196 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSPG5O95196 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CSPG5O95196 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CSPG5O95196 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.49■□□□□ 0.55
CSPG5O95196 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CSPG5O95196 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 AL513480.1-201ENST00000451731 511 ntBASIC18.49■□□□□ 0.55
CSPG5O95196 AC023141.5-201ENST00000458585 616 ntBASIC18.49■□□□□ 0.55
CSPG5O95196 AC093214.1-201ENST00000511688 1107 ntBASIC18.49■□□□□ 0.55
CSPG5O95196 DUTP2-201ENST00000519164 463 ntBASIC18.49■□□□□ 0.55
CSPG5O95196 GGTLC5P-201ENST00000617623 998 ntBASIC18.49■□□□□ 0.55
CSPG5O95196 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.49■□□□□ 0.55
CSPG5O95196 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CSPG5O95196 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.49■□□□□ 0.55
CSPG5O95196 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.49■□□□□ 0.55
CSPG5O95196 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CSPG5O95196 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.49■□□□□ 0.55
CSPG5O95196 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSPG5O95196 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.49■□□□□ 0.55
CSPG5O95196 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.48■□□□□ 0.55
CSPG5O95196 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.48■□□□□ 0.55
CSPG5O95196 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CSPG5O95196 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.48■□□□□ 0.55
CSPG5O95196 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.48■□□□□ 0.55
CSPG5O95196 AC135050.7-201ENST00000624508 2218 ntBASIC18.48■□□□□ 0.55
CSPG5O95196 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.48■□□□□ 0.55
CSPG5O95196 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CSPG5O95196 AC093520.2-201ENST00000561830 333 ntBASIC18.48■□□□□ 0.55
CSPG5O95196 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.48■□□□□ 0.55
CSPG5O95196 AC138761.1-201ENST00000584393 385 ntBASIC18.48■□□□□ 0.55
CSPG5O95196 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.48■□□□□ 0.55
CSPG5O95196 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CSPG5O95196 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.48■□□□□ 0.55
CSPG5O95196 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSPG5O95196 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.47■□□□□ 0.55
CSPG5O95196 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CSPG5O95196 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSPG5O95196 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms