Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 SPDYE21P-201ENST00000413323 827 ntBASIC16.09■□□□□ 0.17
SOX30O94993 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.09■□□□□ 0.17
SOX30O94993 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX30O94993 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.09■□□□□ 0.17
SOX30O94993 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX30O94993 AL121772.3-201ENST00000610840 674 ntBASIC16.09■□□□□ 0.17
SOX30O94993 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SOX30O94993 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.09■□□□□ 0.17
SOX30O94993 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SOX30O94993 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SOX30O94993 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX30O94993 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.09■□□□□ 0.17
SOX30O94993 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX30O94993 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.09■□□□□ 0.17
SOX30O94993 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOX30O94993 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX30O94993 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SOX30O94993 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SOX30O94993 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SOX30O94993 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.09■□□□□ 0.17
SOX30O94993 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOX30O94993 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.08■□□□□ 0.17
SOX30O94993 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.08■□□□□ 0.17
SOX30O94993 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.08■□□□□ 0.17
SOX30O94993 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SOX30O94993 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SOX30O94993 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SOX30O94993 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
SOX30O94993 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SOX30O94993 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.08■□□□□ 0.16
SOX30O94993 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SOX30O94993 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SOX30O94993 RBM17P3-201ENST00000417687 1192 ntBASIC16.08■□□□□ 0.16
SOX30O94993 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.08■□□□□ 0.16
SOX30O94993 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.08■□□□□ 0.16
SOX30O94993 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.08■□□□□ 0.16
SOX30O94993 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.08■□□□□ 0.16
SOX30O94993 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.08■□□□□ 0.16
SOX30O94993 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.08■□□□□ 0.16
SOX30O94993 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
SOX30O94993 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SOX30O94993 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SOX30O94993 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.08■□□□□ 0.16
SOX30O94993 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SOX30O94993 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOX30O94993 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.08■□□□□ 0.16
SOX30O94993 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX30O94993 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX30O94993 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.07■□□□□ 0.16
SOX30O94993 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SOX30O94993 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SOX30O94993 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.07■□□□□ 0.16
SOX30O94993 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX30O94993 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.07■□□□□ 0.16
SOX30O94993 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.07■□□□□ 0.16
SOX30O94993 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.07■□□□□ 0.16
SOX30O94993 MIR3652-201ENST00000579335 131 ntBASIC16.07■□□□□ 0.16
SOX30O94993 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.07■□□□□ 0.16
SOX30O94993 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SOX30O94993 EGFEM1P-202ENST00000431685 1563 ntBASIC16.07■□□□□ 0.16
SOX30O94993 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX30O94993 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SOX30O94993 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.07■□□□□ 0.16
SOX30O94993 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SOX30O94993 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.07■□□□□ 0.16
SOX30O94993 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.07■□□□□ 0.16
SOX30O94993 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.07■□□□□ 0.16
SOX30O94993 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOX30O94993 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms