Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF254O75437 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF254O75437 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF254O75437 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF254O75437 PCDHA14-201ENST00000506751 2298 ntBASIC15.34■□□□□ 0.05
ZNF254O75437 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF254O75437 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF254O75437 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ZNF254O75437 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF254O75437 AC093525.9-201ENST00000624961 1746 ntBASIC15.34■□□□□ 0.05
ZNF254O75437 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF254O75437 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF254O75437 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF254O75437 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF254O75437 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
ZNF254O75437 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF254O75437 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF254O75437 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF254O75437 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF254O75437 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZNF254O75437 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.33■□□□□ 0.05
ZNF254O75437 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
ZNF254O75437 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF254O75437 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF254O75437 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF254O75437 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ZNF254O75437 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF254O75437 AC103564.2-201ENST00000432853 1299 ntBASIC15.33■□□□□ 0.04
ZNF254O75437 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.33■□□□□ 0.04
ZNF254O75437 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF254O75437 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF254O75437 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ZNF254O75437 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF254O75437 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF254O75437 AC046185.3-201ENST00000623228 1824 ntBASIC15.33■□□□□ 0.04
ZNF254O75437 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF254O75437 PCDHB19P-201ENST00000570871 2371 ntBASIC15.33■□□□□ 0.04
ZNF254O75437 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
ZNF254O75437 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF254O75437 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF254O75437 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF254O75437 AC005915.1-201ENST00000624912 2018 ntBASIC15.33■□□□□ 0.04
ZNF254O75437 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF254O75437 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF254O75437 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF254O75437 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ZNF254O75437 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
ZNF254O75437 AL122018.1-201ENST00000446607 2310 ntBASIC15.32■□□□□ 0.04
ZNF254O75437 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
ZNF254O75437 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ZNF254O75437 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ZNF254O75437 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.32■□□□□ 0.04
ZNF254O75437 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
ZNF254O75437 AC007967.3-201ENST00000434308 558 ntBASIC15.32■□□□□ 0.04
ZNF254O75437 AC111152.3-201ENST00000569699 673 ntBASIC15.32■□□□□ 0.04
ZNF254O75437 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
ZNF254O75437 AC019129.2-201ENST00000609837 1235 ntBASIC15.32■□□□□ 0.04
ZNF254O75437 AC006011.2-201ENST00000621313 1158 ntBASIC15.32■□□□□ 0.04
ZNF254O75437 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ZNF254O75437 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF254O75437 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ZNF254O75437 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF254O75437 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF254O75437 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ZNF254O75437 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF254O75437 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ZNF254O75437 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ZNF254O75437 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
ZNF254O75437 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF254O75437 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ZNF254O75437 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF254O75437 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
ZNF254O75437 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF254O75437 UBALD1-205ENST00000590891 2641 ntBASIC15.31■□□□□ 0.04
ZNF254O75437 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF254O75437 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ZNF254O75437 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF254O75437 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF254O75437 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF254O75437 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF254O75437 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms