Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.05■□□□□ 0.8
CTNND1O60716 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.05■□□□□ 0.8
CTNND1O60716 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTNND1O60716 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CTNND1O60716 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNND1O60716 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTNND1O60716 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CTNND1O60716 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CTNND1O60716 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CTNND1O60716 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTNND1O60716 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.05■□□□□ 0.8
CTNND1O60716 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CTNND1O60716 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.04■□□□□ 0.8
CTNND1O60716 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.04■□□□□ 0.8
CTNND1O60716 TFAMP1-201ENST00000412727 736 ntBASIC20.04■□□□□ 0.8
CTNND1O60716 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.04■□□□□ 0.8
CTNND1O60716 AC005237.2-201ENST00000434368 219 ntBASIC20.04■□□□□ 0.8
CTNND1O60716 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.04■□□□□ 0.8
CTNND1O60716 FAM86GP-201ENST00000448322 971 ntBASIC20.04■□□□□ 0.8
CTNND1O60716 RN7SL589P-201ENST00000481268 310 ntBASIC20.04■□□□□ 0.8
CTNND1O60716 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.04■□□□□ 0.8
CTNND1O60716 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.04■□□□□ 0.8
CTNND1O60716 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.04■□□□□ 0.8
CTNND1O60716 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.04■□□□□ 0.8
CTNND1O60716 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.04■□□□□ 0.8
CTNND1O60716 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.04■□□□□ 0.8
CTNND1O60716 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTNND1O60716 AKAP8P1-201ENST00000434743 1349 ntBASIC20.03■□□□□ 0.8
CTNND1O60716 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CTNND1O60716 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.03■□□□□ 0.8
CTNND1O60716 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.03■□□□□ 0.8
CTNND1O60716 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CTNND1O60716 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CTNND1O60716 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 AL592309.1-201ENST00000443127 649 ntBASIC20.03■□□□□ 0.8
CTNND1O60716 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.03■□□□□ 0.8
CTNND1O60716 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.03■□□□□ 0.8
CTNND1O60716 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.03■□□□□ 0.8
CTNND1O60716 AC079140.1-201ENST00000508039 487 ntBASIC20.03■□□□□ 0.8
CTNND1O60716 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 AC243562.1-201ENST00000560672 389 ntBASIC20.03■□□□□ 0.8
CTNND1O60716 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.03■□□□□ 0.8
CTNND1O60716 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.03■□□□□ 0.8
CTNND1O60716 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CTNND1O60716 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.03■□□□□ 0.8
CTNND1O60716 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CTNND1O60716 BICD1-207ENST00000551848 1962 ntBASIC20.03■□□□□ 0.8
CTNND1O60716 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNND1O60716 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTNND1O60716 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.02■□□□□ 0.8
CTNND1O60716 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTNND1O60716 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.02■□□□□ 0.8
CTNND1O60716 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTNND1O60716 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTNND1O60716 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.02■□□□□ 0.8
CTNND1O60716 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.02■□□□□ 0.8
CTNND1O60716 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.02■□□□□ 0.8
CTNND1O60716 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.02■□□□□ 0.8
CTNND1O60716 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.02■□□□□ 0.8
CTNND1O60716 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CTNND1O60716 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.02■□□□□ 0.8
CTNND1O60716 AC005412.3-201ENST00000580309 715 ntBASIC20.02■□□□□ 0.8
CTNND1O60716 AC005498.2-205ENST00000593218 784 ntBASIC20.02■□□□□ 0.8
CTNND1O60716 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.02■□□□□ 0.8
CTNND1O60716 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CTNND1O60716 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CTNND1O60716 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.02■□□□□ 0.8
CTNND1O60716 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms