Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 AC009336.1-201ENST00000608941 1553 ntBASIC16.3■□□□□ 0.2
PLOD3O60568 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.29■□□□□ 0.2
PLOD3O60568 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PLOD3O60568 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PLOD3O60568 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.29■□□□□ 0.2
PLOD3O60568 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PLOD3O60568 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.29■□□□□ 0.2
PLOD3O60568 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.29■□□□□ 0.2
PLOD3O60568 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PLOD3O60568 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.29■□□□□ 0.2
PLOD3O60568 STK19B-204ENST00000512515 211 ntBASIC16.29■□□□□ 0.2
PLOD3O60568 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.29■□□□□ 0.2
PLOD3O60568 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.29■□□□□ 0.2
PLOD3O60568 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.29■□□□□ 0.2
PLOD3O60568 AL591684.3-201ENST00000605187 298 ntBASIC16.29■□□□□ 0.2
PLOD3O60568 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.29■□□□□ 0.2
PLOD3O60568 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PLOD3O60568 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.29■□□□□ 0.2
PLOD3O60568 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PLOD3O60568 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.28■□□□□ 0.2
PLOD3O60568 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PLOD3O60568 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.28■□□□□ 0.2
PLOD3O60568 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
PLOD3O60568 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.28■□□□□ 0.2
PLOD3O60568 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PLOD3O60568 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 KLF4P1-201ENST00000412782 1185 ntBASIC16.28■□□□□ 0.2
PLOD3O60568 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.28■□□□□ 0.2
PLOD3O60568 ABCD1P5-201ENST00000445663 754 ntBASIC16.28■□□□□ 0.2
PLOD3O60568 FOSL1P1-201ENST00000511041 816 ntBASIC16.28■□□□□ 0.2
PLOD3O60568 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.28■□□□□ 0.2
PLOD3O60568 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 AC138894.3-201ENST00000603787 634 ntBASIC16.28■□□□□ 0.2
PLOD3O60568 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
PLOD3O60568 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.28■□□□□ 0.2
PLOD3O60568 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.28■□□□□ 0.2
PLOD3O60568 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PLOD3O60568 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PLOD3O60568 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
PLOD3O60568 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.28■□□□□ 0.2
PLOD3O60568 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PLOD3O60568 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
PLOD3O60568 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PLOD3O60568 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.27■□□□□ 0.2
PLOD3O60568 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PLOD3O60568 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PLOD3O60568 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PLOD3O60568 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.27■□□□□ 0.2
PLOD3O60568 AC116353.5-201ENST00000638148 1699 ntBASIC16.27■□□□□ 0.2
PLOD3O60568 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms