Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.69■□□□□ 0.58
EXTL3O43909 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EXTL3O43909 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 AC243591.1-201ENST00000452967 1364 ntBASIC18.68■□□□□ 0.58
EXTL3O43909 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
EXTL3O43909 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.68■□□□□ 0.58
EXTL3O43909 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.68■□□□□ 0.58
EXTL3O43909 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
EXTL3O43909 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 AP002414.1-201ENST00000391405 1147 ntBASIC18.68■□□□□ 0.58
EXTL3O43909 AC092910.1-201ENST00000482027 1129 ntBASIC18.68■□□□□ 0.58
EXTL3O43909 RPS15P9-201ENST00000494093 319 ntBASIC18.68■□□□□ 0.58
EXTL3O43909 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.68■□□□□ 0.58
EXTL3O43909 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
EXTL3O43909 TERC-201ENST00000602385 541 ntBASIC18.68■□□□□ 0.58
EXTL3O43909 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.68■□□□□ 0.58
EXTL3O43909 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
EXTL3O43909 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.68■□□□□ 0.58
EXTL3O43909 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
EXTL3O43909 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.68■□□□□ 0.58
EXTL3O43909 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
EXTL3O43909 OR6D1P-202ENST00000641007 5290 ntBASIC18.67■□□□□ 0.58
EXTL3O43909 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
EXTL3O43909 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.67■□□□□ 0.58
EXTL3O43909 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.67■□□□□ 0.58
EXTL3O43909 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 AP001094.4-201ENST00000579008 2176 ntBASIC18.67■□□□□ 0.58
EXTL3O43909 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
EXTL3O43909 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.67■□□□□ 0.58
EXTL3O43909 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.67■□□□□ 0.58
EXTL3O43909 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.67■□□□□ 0.58
EXTL3O43909 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.67■□□□□ 0.58
EXTL3O43909 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.67■□□□□ 0.58
EXTL3O43909 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.67■□□□□ 0.58
EXTL3O43909 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EXTL3O43909 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.67■□□□□ 0.58
EXTL3O43909 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.67■□□□□ 0.58
EXTL3O43909 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EXTL3O43909 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.67■□□□□ 0.58
EXTL3O43909 AC005593.1-201ENST00000624894 515 ntBASIC18.67■□□□□ 0.58
EXTL3O43909 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.67■□□□□ 0.58
EXTL3O43909 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.67■□□□□ 0.58
EXTL3O43909 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
EXTL3O43909 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.67■□□□□ 0.58
EXTL3O43909 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
EXTL3O43909 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EXTL3O43909 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
EXTL3O43909 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EXTL3O43909 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
EXTL3O43909 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EXTL3O43909 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EXTL3O43909 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
EXTL3O43909 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EXTL3O43909 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EXTL3O43909 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
EXTL3O43909 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
EXTL3O43909 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EXTL3O43909 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.66■□□□□ 0.58
EXTL3O43909 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.66■□□□□ 0.58
EXTL3O43909 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EXTL3O43909 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EXTL3O43909 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EXTL3O43909 FRMD8P1-201ENST00000440433 1524 ntBASIC18.66■□□□□ 0.58
EXTL3O43909 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
EXTL3O43909 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EXTL3O43909 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
EXTL3O43909 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.66■□□□□ 0.58
EXTL3O43909 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
EXTL3O43909 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms