Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KDELR3O43731 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
KDELR3O43731 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
KDELR3O43731 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.45■□□□□ 0.38
KDELR3O43731 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 MRPL20P1-201ENST00000400819 433 ntBASIC17.45■□□□□ 0.38
KDELR3O43731 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.45■□□□□ 0.38
KDELR3O43731 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.45■□□□□ 0.38
KDELR3O43731 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
KDELR3O43731 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 FRMD8P1-201ENST00000440433 1524 ntBASIC17.45■□□□□ 0.38
KDELR3O43731 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.45■□□□□ 0.38
KDELR3O43731 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.45■□□□□ 0.38
KDELR3O43731 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDELR3O43731 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
KDELR3O43731 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
KDELR3O43731 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDELR3O43731 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDELR3O43731 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDELR3O43731 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.44■□□□□ 0.38
KDELR3O43731 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
KDELR3O43731 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDELR3O43731 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDELR3O43731 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDELR3O43731 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
KDELR3O43731 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.44■□□□□ 0.38
KDELR3O43731 PRSS29P-201ENST00000440800 595 ntBASIC17.44■□□□□ 0.38
KDELR3O43731 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KDELR3O43731 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
KDELR3O43731 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.44■□□□□ 0.38
KDELR3O43731 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.44■□□□□ 0.38
KDELR3O43731 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.44■□□□□ 0.38
KDELR3O43731 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
KDELR3O43731 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDELR3O43731 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
KDELR3O43731 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.44■□□□□ 0.38
KDELR3O43731 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
KDELR3O43731 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDELR3O43731 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDELR3O43731 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDELR3O43731 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
KDELR3O43731 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.44■□□□□ 0.38
KDELR3O43731 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDELR3O43731 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDELR3O43731 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.43■□□□□ 0.38
KDELR3O43731 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.43■□□□□ 0.38
KDELR3O43731 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.43■□□□□ 0.38
KDELR3O43731 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 AP000347.1-202ENST00000435868 847 ntBASIC17.43■□□□□ 0.38
KDELR3O43731 AC087163.2-201ENST00000457299 853 ntBASIC17.43■□□□□ 0.38
KDELR3O43731 AC124947.2-201ENST00000547118 1133 ntBASIC17.43■□□□□ 0.38
KDELR3O43731 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.43■□□□□ 0.38
KDELR3O43731 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
KDELR3O43731 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
KDELR3O43731 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.43■□□□□ 0.38
KDELR3O43731 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.43■□□□□ 0.38
KDELR3O43731 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.43■□□□□ 0.38
KDELR3O43731 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.43■□□□□ 0.38
KDELR3O43731 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.43■□□□□ 0.38
KDELR3O43731 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.43■□□□□ 0.38
KDELR3O43731 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDELR3O43731 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
KDELR3O43731 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KDELR3O43731 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
KDELR3O43731 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.42■□□□□ 0.38
KDELR3O43731 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms