Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SNAI2O43623 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
SNAI2O43623 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SNAI2O43623 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SNAI2O43623 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNAI2O43623 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.97□□□□□ -0.33
SNAI2O43623 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
SNAI2O43623 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.96□□□□□ -0.33
SNAI2O43623 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SNAI2O43623 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.96□□□□□ -0.33
SNAI2O43623 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.33
SNAI2O43623 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SNAI2O43623 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SNAI2O43623 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.96□□□□□ -0.33
SNAI2O43623 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 RPS2P55-201ENST00000397318 883 ntBASIC12.96□□□□□ -0.33
SNAI2O43623 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 AC012618.2-201ENST00000428058 849 ntBASIC12.96□□□□□ -0.33
SNAI2O43623 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.96□□□□□ -0.33
SNAI2O43623 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.96□□□□□ -0.33
SNAI2O43623 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.96□□□□□ -0.33
SNAI2O43623 AC107956.1-201ENST00000494359 873 ntBASIC12.96□□□□□ -0.33
SNAI2O43623 AC116562.4-202ENST00000641738 218 ntBASIC12.96□□□□□ -0.33
SNAI2O43623 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SNAI2O43623 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SNAI2O43623 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNAI2O43623 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.96□□□□□ -0.34
SNAI2O43623 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNAI2O43623 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
SNAI2O43623 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
SNAI2O43623 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SNAI2O43623 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNAI2O43623 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SNAI2O43623 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.95□□□□□ -0.34
SNAI2O43623 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SNAI2O43623 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SNAI2O43623 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
SNAI2O43623 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.95□□□□□ -0.34
SNAI2O43623 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SNAI2O43623 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.95□□□□□ -0.34
SNAI2O43623 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.95□□□□□ -0.34
SNAI2O43623 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 AC005104.2-201ENST00000427818 678 ntBASIC12.95□□□□□ -0.34
SNAI2O43623 AC007663.1-201ENST00000438948 1240 ntBASIC12.95□□□□□ -0.34
SNAI2O43623 KRT18P65-201ENST00000439811 1286 ntBASIC12.95□□□□□ -0.34
SNAI2O43623 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.95□□□□□ -0.34
SNAI2O43623 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.95□□□□□ -0.34
SNAI2O43623 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SNAI2O43623 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.95□□□□□ -0.34
SNAI2O43623 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
SNAI2O43623 AC010653.2-201ENST00000623505 997 ntBASIC12.95□□□□□ -0.34
SNAI2O43623 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.95□□□□□ -0.34
SNAI2O43623 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SNAI2O43623 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.95□□□□□ -0.34
SNAI2O43623 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
SNAI2O43623 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNAI2O43623 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms