Protein–RNA interactions for Protein: O43526

KCNQ2, Potassium voltage-gated channel subfamily KQT member 2, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2O43526 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KCNQ2O43526 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KCNQ2O43526 MIR658-201ENST00000385210 100 ntBASIC21.95■■□□□ 1.1
KCNQ2O43526 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
KCNQ2O43526 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KCNQ2O43526 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
KCNQ2O43526 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.95■■□□□ 1.1
KCNQ2O43526 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.95■■□□□ 1.1
KCNQ2O43526 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.95■■□□□ 1.1
KCNQ2O43526 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC21.95■■□□□ 1.1
KCNQ2O43526 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC21.95■■□□□ 1.1
KCNQ2O43526 MIR4525-201ENST00000580000 75 ntBASIC21.95■■□□□ 1.1
KCNQ2O43526 AL031055.1-201ENST00000606362 631 ntBASIC21.95■■□□□ 1.1
KCNQ2O43526 AC003101.2-201ENST00000612557 442 ntBASIC21.95■■□□□ 1.1
KCNQ2O43526 IGHV3-72-202ENST00000621503 303 ntBASIC21.95■■□□□ 1.1
KCNQ2O43526 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
KCNQ2O43526 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.95■■□□□ 1.1
KCNQ2O43526 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KCNQ2O43526 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KCNQ2O43526 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KCNQ2O43526 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.95■■□□□ 1.1
KCNQ2O43526 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.94■■□□□ 1.1
KCNQ2O43526 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
KCNQ2O43526 AC142381.1-201ENST00000426099 345 ntBASIC21.94■■□□□ 1.1
KCNQ2O43526 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
KCNQ2O43526 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
KCNQ2O43526 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.94■■□□□ 1.1
KCNQ2O43526 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
KCNQ2O43526 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KCNQ2O43526 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KCNQ2O43526 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
KCNQ2O43526 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KCNQ2O43526 PARP8-206ENST00000503665 572 ntTSL 4 BASIC21.94■■□□□ 1.1
KCNQ2O43526 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.94■■□□□ 1.1
KCNQ2O43526 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.94■■□□□ 1.1
KCNQ2O43526 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
KCNQ2O43526 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
KCNQ2O43526 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC21.94■■□□□ 1.1
KCNQ2O43526 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21.94■■□□□ 1.1
KCNQ2O43526 RARRES2P9-201ENST00000565168 469 ntBASIC21.94■■□□□ 1.1
KCNQ2O43526 ARL16-202ENST00000570561 768 ntTSL 2 BASIC21.94■■□□□ 1.1
KCNQ2O43526 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.94■■□□□ 1.1
KCNQ2O43526 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.94■■□□□ 1.1
KCNQ2O43526 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.94■■□□□ 1.1
KCNQ2O43526 AP3S2-216ENST00000617003 1561 ntBASIC21.94■■□□□ 1.1
KCNQ2O43526 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
KCNQ2O43526 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.94■■□□□ 1.1
KCNQ2O43526 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
KCNQ2O43526 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.94■■□□□ 1.1
KCNQ2O43526 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ2O43526 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ2O43526 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ2O43526 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ2O43526 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ2O43526 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ2O43526 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
KCNQ2O43526 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ2O43526 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ2O43526 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.93■■□□□ 1.1
KCNQ2O43526 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.93■■□□□ 1.1
KCNQ2O43526 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
KCNQ2O43526 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.93■■□□□ 1.1
KCNQ2O43526 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ2O43526 AL353732.1-201ENST00000569618 1459 ntBASIC21.93■■□□□ 1.1
KCNQ2O43526 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.93■■□□□ 1.1
KCNQ2O43526 AC007541.1-201ENST00000570282 1469 ntBASIC21.93■■□□□ 1.1
KCNQ2O43526 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ2O43526 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC21.93■■□□□ 1.1
KCNQ2O43526 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
KCNQ2O43526 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KCNQ2O43526 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
KCNQ2O43526 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.93■■□□□ 1.1
KCNQ2O43526 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.92■■□□□ 1.1
KCNQ2O43526 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.92■■□□□ 1.1
KCNQ2O43526 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.92■■□□□ 1.1
KCNQ2O43526 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
KCNQ2O43526 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
KCNQ2O43526 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
KCNQ2O43526 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.92■■□□□ 1.1
KCNQ2O43526 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.92■■□□□ 1.1
KCNQ2O43526 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC21.92■■□□□ 1.1
KCNQ2O43526 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.92■■□□□ 1.1
KCNQ2O43526 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
KCNQ2O43526 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.92■■□□□ 1.1
KCNQ2O43526 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.92■■□□□ 1.1
KCNQ2O43526 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNQ2O43526 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms