Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RIPK2O43353 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RIPK2O43353 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.55■□□□□ 0.4
RIPK2O43353 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RIPK2O43353 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RIPK2O43353 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RIPK2O43353 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RIPK2O43353 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RIPK2O43353 AL596257.1-201ENST00000641463 2694 ntBASIC17.55■□□□□ 0.4
RIPK2O43353 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RIPK2O43353 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RIPK2O43353 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.54■□□□□ 0.4
RIPK2O43353 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.54■□□□□ 0.4
RIPK2O43353 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.54■□□□□ 0.4
RIPK2O43353 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RIPK2O43353 MMP23A-201ENST00000234610 1017 ntBASIC17.54■□□□□ 0.4
RIPK2O43353 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.54■□□□□ 0.4
RIPK2O43353 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 SPDYE15P-201ENST00000424157 909 ntBASIC17.54■□□□□ 0.4
RIPK2O43353 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.54■□□□□ 0.4
RIPK2O43353 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.54■□□□□ 0.4
RIPK2O43353 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.54■□□□□ 0.4
RIPK2O43353 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.54■□□□□ 0.4
RIPK2O43353 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.54■□□□□ 0.4
RIPK2O43353 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.54■□□□□ 0.4
RIPK2O43353 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RIPK2O43353 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
RIPK2O43353 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.54■□□□□ 0.4
RIPK2O43353 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
RIPK2O43353 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RIPK2O43353 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.53■□□□□ 0.4
RIPK2O43353 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RIPK2O43353 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
RIPK2O43353 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RIPK2O43353 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.53■□□□□ 0.4
RIPK2O43353 AC007967.3-201ENST00000434308 558 ntBASIC17.53■□□□□ 0.4
RIPK2O43353 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.53■□□□□ 0.4
RIPK2O43353 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RIPK2O43353 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.53■□□□□ 0.4
RIPK2O43353 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.53■□□□□ 0.4
RIPK2O43353 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.53■□□□□ 0.4
RIPK2O43353 GPR32P1-201ENST00000601788 811 ntBASIC17.53■□□□□ 0.4
RIPK2O43353 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.53■□□□□ 0.4
RIPK2O43353 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RIPK2O43353 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.53■□□□□ 0.4
RIPK2O43353 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RIPK2O43353 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RIPK2O43353 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.53■□□□□ 0.4
RIPK2O43353 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
RIPK2O43353 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RIPK2O43353 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.53■□□□□ 0.4
RIPK2O43353 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RIPK2O43353 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RIPK2O43353 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RIPK2O43353 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
RIPK2O43353 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPK2O43353 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPK2O43353 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPK2O43353 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RIPK2O43353 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPK2O43353 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RIPK2O43353 AL645728.1-201ENST00000366221 2101 ntBASIC17.52■□□□□ 0.4
RIPK2O43353 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms