Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP3O43295 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SRGAP3O43295 PI4KAP1-204ENST00000612579 1703 ntBASIC21.38■■□□□ 1.01
SRGAP3O43295 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.37■■□□□ 1.01
SRGAP3O43295 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRGAP3O43295 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRGAP3O43295 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
SRGAP3O43295 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRGAP3O43295 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRGAP3O43295 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SRGAP3O43295 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
SRGAP3O43295 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.37■■□□□ 1.01
SRGAP3O43295 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
SRGAP3O43295 AC145285.3-201ENST00000564603 959 ntBASIC21.37■■□□□ 1.01
SRGAP3O43295 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRGAP3O43295 Z83851.2-201ENST00000609564 659 ntBASIC21.37■■□□□ 1.01
SRGAP3O43295 AF228730.7-201ENST00000641842 219 ntBASIC21.37■■□□□ 1.01
SRGAP3O43295 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRGAP3O43295 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRGAP3O43295 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SRGAP3O43295 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.37■■□□□ 1.01
SRGAP3O43295 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SRGAP3O43295 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SRGAP3O43295 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.37■■□□□ 1.01
SRGAP3O43295 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SRGAP3O43295 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SRGAP3O43295 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SRGAP3O43295 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SRGAP3O43295 LINC02012-201ENST00000608206 1725 ntBASIC21.36■■□□□ 1.01
SRGAP3O43295 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SRGAP3O43295 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SRGAP3O43295 AC108073.2-201ENST00000464002 357 ntBASIC21.36■■□□□ 1.01
SRGAP3O43295 AC108751.1-201ENST00000490852 363 ntBASIC21.36■■□□□ 1.01
SRGAP3O43295 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SRGAP3O43295 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.36■■□□□ 1.01
SRGAP3O43295 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.36■■□□□ 1.01
SRGAP3O43295 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SRGAP3O43295 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.36■■□□□ 1.01
SRGAP3O43295 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SRGAP3O43295 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SRGAP3O43295 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SRGAP3O43295 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SRGAP3O43295 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SRGAP3O43295 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SRGAP3O43295 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRGAP3O43295 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SRGAP3O43295 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRGAP3O43295 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRGAP3O43295 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SRGAP3O43295 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SRGAP3O43295 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SRGAP3O43295 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SRGAP3O43295 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRGAP3O43295 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRGAP3O43295 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
SRGAP3O43295 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRGAP3O43295 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.35■■□□□ 1.01
SRGAP3O43295 PAWRP1-201ENST00000451083 565 ntBASIC21.35■■□□□ 1.01
SRGAP3O43295 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRGAP3O43295 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.35■■□□□ 1.01
SRGAP3O43295 AC034105.1-201ENST00000563488 319 ntBASIC21.35■■□□□ 1.01
SRGAP3O43295 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.35■■□□□ 1.01
SRGAP3O43295 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.35■■□□□ 1.01
SRGAP3O43295 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.35■■□□□ 1.01
SRGAP3O43295 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SRGAP3O43295 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRGAP3O43295 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
SRGAP3O43295 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.35■■□□□ 1.01
SRGAP3O43295 AC092053.1-201ENST00000605787 1936 ntBASIC21.35■■□□□ 1.01
SRGAP3O43295 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SRGAP3O43295 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.34■■□□□ 1.01
SRGAP3O43295 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SRGAP3O43295 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.34■■□□□ 1.01
SRGAP3O43295 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.34■■□□□ 1.01
SRGAP3O43295 AC106730.1-201ENST00000566722 1090 ntBASIC21.34■■□□□ 1.01
SRGAP3O43295 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SRGAP3O43295 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.34■■□□□ 1.01
SRGAP3O43295 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.34■■□□□ 1.01
SRGAP3O43295 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.34■■□□□ 1.01
SRGAP3O43295 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.34■■□□□ 1.01
SRGAP3O43295 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SRGAP3O43295 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP3O43295 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms