Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.42■□□□□ 0.22
CASQ2O14958 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CASQ2O14958 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.42■□□□□ 0.22
CASQ2O14958 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.42■□□□□ 0.22
CASQ2O14958 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.42■□□□□ 0.22
CASQ2O14958 AC026271.3-201ENST00000571884 352 ntBASIC16.42■□□□□ 0.22
CASQ2O14958 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.42■□□□□ 0.22
CASQ2O14958 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.42■□□□□ 0.22
CASQ2O14958 AC087623.3-201ENST00000607047 1098 ntBASIC16.42■□□□□ 0.22
CASQ2O14958 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.42■□□□□ 0.22
CASQ2O14958 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.42■□□□□ 0.22
CASQ2O14958 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CASQ2O14958 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.42■□□□□ 0.22
CASQ2O14958 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.42■□□□□ 0.22
CASQ2O14958 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CASQ2O14958 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CASQ2O14958 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CASQ2O14958 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.41■□□□□ 0.22
CASQ2O14958 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CASQ2O14958 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.41■□□□□ 0.22
CASQ2O14958 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CASQ2O14958 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CASQ2O14958 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.41■□□□□ 0.22
CASQ2O14958 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CASQ2O14958 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.41■□□□□ 0.22
CASQ2O14958 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CASQ2O14958 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CASQ2O14958 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CASQ2O14958 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.41■□□□□ 0.22
CASQ2O14958 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.41■□□□□ 0.22
CASQ2O14958 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASQ2O14958 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.41■□□□□ 0.22
CASQ2O14958 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CASQ2O14958 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CASQ2O14958 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CASQ2O14958 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.4■□□□□ 0.22
CASQ2O14958 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CASQ2O14958 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.4■□□□□ 0.22
CASQ2O14958 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.4■□□□□ 0.22
CASQ2O14958 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.4■□□□□ 0.22
CASQ2O14958 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.4■□□□□ 0.22
CASQ2O14958 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.4■□□□□ 0.22
CASQ2O14958 MTHFR-217ENST00000641820 1569 ntBASIC16.4■□□□□ 0.22
CASQ2O14958 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CASQ2O14958 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.4■□□□□ 0.22
CASQ2O14958 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.4■□□□□ 0.22
CASQ2O14958 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CASQ2O14958 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.4■□□□□ 0.22
CASQ2O14958 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.4■□□□□ 0.22
CASQ2O14958 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.4■□□□□ 0.22
CASQ2O14958 MTDHP1-201ENST00000605323 784 ntBASIC16.4■□□□□ 0.22
CASQ2O14958 AC083880.1-201ENST00000608266 535 ntBASIC16.4■□□□□ 0.22
CASQ2O14958 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CASQ2O14958 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.4■□□□□ 0.22
CASQ2O14958 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.4■□□□□ 0.22
CASQ2O14958 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.4■□□□□ 0.22
CASQ2O14958 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
CASQ2O14958 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms