Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN4O14493 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CLDN4O14493 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN4O14493 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN4O14493 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN4O14493 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN4O14493 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CLDN4O14493 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CLDN4O14493 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CLDN4O14493 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN4O14493 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 CROCCP2-202ENST00000412962 2773 ntBASIC16.25■□□□□ 0.19
CLDN4O14493 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN4O14493 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 MRPL3P1-201ENST00000400109 1033 ntBASIC16.25■□□□□ 0.19
CLDN4O14493 AC009078.2-202ENST00000463353 338 ntBASIC16.25■□□□□ 0.19
CLDN4O14493 AC105339.3-201ENST00000560043 636 ntBASIC16.25■□□□□ 0.19
CLDN4O14493 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN4O14493 SLC25A6P4-201ENST00000586535 553 ntBASIC16.25■□□□□ 0.19
CLDN4O14493 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN4O14493 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN4O14493 AC004706.3-202ENST00000621574 984 ntBASIC16.25■□□□□ 0.19
CLDN4O14493 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 AL023806.1-201ENST00000603994 1649 ntBASIC16.25■□□□□ 0.19
CLDN4O14493 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CLDN4O14493 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CLDN4O14493 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CLDN4O14493 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN4O14493 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN4O14493 AC005332.8-201ENST00000622750 2735 ntBASIC16.25■□□□□ 0.19
CLDN4O14493 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN4O14493 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN4O14493 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLDN4O14493 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN4O14493 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CLDN4O14493 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN4O14493 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN4O14493 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN4O14493 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN4O14493 HNRNPDP1-201ENST00000439535 754 ntBASIC16.24■□□□□ 0.19
CLDN4O14493 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN4O14493 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN4O14493 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
CLDN4O14493 AL353135.1-201ENST00000606729 504 ntBASIC16.24■□□□□ 0.19
CLDN4O14493 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 AC148477.8-201ENST00000624298 468 ntBASIC16.24■□□□□ 0.19
CLDN4O14493 FAM215A-202ENST00000632077 792 ntBASIC16.24■□□□□ 0.19
CLDN4O14493 PGM5P2-202ENST00000637225 1043 ntBASIC16.24■□□□□ 0.19
CLDN4O14493 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN4O14493 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN4O14493 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN4O14493 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN4O14493 AC093525.9-201ENST00000624961 1746 ntBASIC16.23■□□□□ 0.19
CLDN4O14493 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CLDN4O14493 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN4O14493 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN4O14493 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CLDN4O14493 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN4O14493 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLDN4O14493 FDX1P1-201ENST00000449115 551 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms