Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM38O00635 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.39■□□□□ 0.38
TRIM38O00635 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.39■□□□□ 0.38
TRIM38O00635 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM38O00635 AC132938.6-201ENST00000623828 1655 ntBASIC17.39■□□□□ 0.37
TRIM38O00635 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRIM38O00635 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM38O00635 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM38O00635 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM38O00635 FAM220CP-201ENST00000395253 831 ntBASIC17.39■□□□□ 0.37
TRIM38O00635 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.39■□□□□ 0.37
TRIM38O00635 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM38O00635 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM38O00635 AC005104.2-201ENST00000427818 678 ntBASIC17.39■□□□□ 0.37
TRIM38O00635 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM38O00635 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM38O00635 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM38O00635 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TRIM38O00635 FAM197Y3-203ENST00000618346 717 ntBASIC17.39■□□□□ 0.37
TRIM38O00635 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM38O00635 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM38O00635 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM38O00635 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM38O00635 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM38O00635 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM38O00635 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM38O00635 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM38O00635 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM38O00635 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM38O00635 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM38O00635 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRIM38O00635 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM38O00635 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM38O00635 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TRIM38O00635 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM38O00635 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM38O00635 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM38O00635 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM38O00635 AC007967.3-201ENST00000434308 558 ntBASIC17.38■□□□□ 0.37
TRIM38O00635 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM38O00635 AC105339.3-201ENST00000560043 636 ntBASIC17.38■□□□□ 0.37
TRIM38O00635 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM38O00635 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM38O00635 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.38■□□□□ 0.37
TRIM38O00635 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM38O00635 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.38■□□□□ 0.37
TRIM38O00635 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM38O00635 AC107918.4-202ENST00000641623 219 ntBASIC17.38■□□□□ 0.37
TRIM38O00635 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRIM38O00635 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM38O00635 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
TRIM38O00635 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM38O00635 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 AP002414.3-201ENST00000589352 1468 ntBASIC17.37■□□□□ 0.37
TRIM38O00635 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRIM38O00635 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM38O00635 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM38O00635 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
TRIM38O00635 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM38O00635 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM38O00635 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRIM38O00635 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 AC055717.3-201ENST00000622967 595 ntBASIC17.37■□□□□ 0.37
TRIM38O00635 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM38O00635 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TRIM38O00635 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRIM38O00635 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM38O00635 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms