Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KPNA4O00629 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KPNA4O00629 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
KPNA4O00629 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KPNA4O00629 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.21■□□□□ 0.18
KPNA4O00629 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.21■□□□□ 0.18
KPNA4O00629 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
KPNA4O00629 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.21■□□□□ 0.18
KPNA4O00629 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
KPNA4O00629 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.2■□□□□ 0.18
KPNA4O00629 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.2■□□□□ 0.18
KPNA4O00629 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
KPNA4O00629 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.2■□□□□ 0.18
KPNA4O00629 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
KPNA4O00629 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 AC026691.1-201ENST00000602502 2017 ntBASIC16.2■□□□□ 0.18
KPNA4O00629 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.2■□□□□ 0.18
KPNA4O00629 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.2■□□□□ 0.18
KPNA4O00629 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.2■□□□□ 0.18
KPNA4O00629 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
KPNA4O00629 ZNF444P1-201ENST00000559497 298 ntBASIC16.2■□□□□ 0.18
KPNA4O00629 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 AC012306.2-201ENST00000609350 630 ntBASIC16.2■□□□□ 0.18
KPNA4O00629 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
KPNA4O00629 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
KPNA4O00629 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.2■□□□□ 0.18
KPNA4O00629 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 AC097493.4-201ENST00000641197 219 ntBASIC16.2■□□□□ 0.18
KPNA4O00629 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
KPNA4O00629 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.2■□□□□ 0.18
KPNA4O00629 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.2■□□□□ 0.18
KPNA4O00629 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.2■□□□□ 0.18
KPNA4O00629 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
KPNA4O00629 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KPNA4O00629 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
KPNA4O00629 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
KPNA4O00629 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 REXO1L11P-201ENST00000620964 1927 ntBASIC16.19■□□□□ 0.18
KPNA4O00629 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
KPNA4O00629 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.19■□□□□ 0.18
KPNA4O00629 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
KPNA4O00629 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.19■□□□□ 0.18
KPNA4O00629 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.19■□□□□ 0.18
KPNA4O00629 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
KPNA4O00629 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
KPNA4O00629 HLA-F-220ENST00000434407 884 ntBASIC16.19■□□□□ 0.18
KPNA4O00629 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.19■□□□□ 0.18
KPNA4O00629 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
KPNA4O00629 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KPNA4O00629 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.19■□□□□ 0.18
KPNA4O00629 HLA-J-201ENST00000462773 1622 ntBASIC16.19■□□□□ 0.18
KPNA4O00629 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.19■□□□□ 0.18
KPNA4O00629 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.19■□□□□ 0.18
KPNA4O00629 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KPNA4O00629 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KPNA4O00629 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KPNA4O00629 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KPNA4O00629 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.18■□□□□ 0.18
KPNA4O00629 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KPNA4O00629 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KPNA4O00629 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.18■□□□□ 0.18
KPNA4O00629 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KPNA4O00629 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KPNA4O00629 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KPNA4O00629 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
KPNA4O00629 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms