Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV5A0A0B4J249 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 AC006449.5-201ENST00000610658 2098 ntBASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 AC068472.1-201ENST00000474589 881 ntBASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 AC140113.3-201ENST00000605663 199 ntBASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV5A0A0B4J249 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 PCDHA1-201ENST00000378133 2726 ntBASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 AC096633.1-201ENST00000422446 749 ntBASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 AC002558.1-201ENST00000488906 803 ntBASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 TMEM191A-211ENST00000637163 1067 ntBASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 AC010460.3-201ENST00000511359 1579 ntBASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV5A0A0B4J249 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms