Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 AC129492.6-201ENST00000611383 1305 ntBASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV5A0A0B4J1U4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 HTR5BP-201ENST00000430851 1154 ntBASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 FAM185BP-201ENST00000443595 716 ntBASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 AL513480.1-201ENST00000451731 511 ntBASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 AC074386.1-202ENST00000463561 864 ntBASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 AC092183.1-201ENST00000469884 875 ntBASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 ALG1L5P-201ENST00000482043 771 ntBASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 SLC25A6P2-201ENST00000497974 877 ntBASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 AL078644.1-201ENST00000609881 752 ntBASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRGV5A0A0B4J1U4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 MKNK2P1-201ENST00000437526 628 ntBASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 MIR4469-201ENST00000583919 79 ntBASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 AP001160.2-201ENST00000596071 487 ntBASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 GNAS-203ENST00000306120 1878 ntBASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV5A0A0B4J1U4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 AC134043.2-201ENST00000624206 2238 ntBASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV5A0A0B4J1U4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms