Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC112907.2-201ENST00000448639 330 ntBASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 IGHV3-52-201ENST00000519770 353 ntBASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC019129.2-201ENST00000609837 1235 ntBASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 HYMAI.1-201ENST00000620949 238 ntBASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 AC133561.5-201ENST00000635547 218 ntBASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 Z83836.1-201ENST00000624605 1642 ntBASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRBV6-7A0A0A0MS04 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 VENTXP5-201ENST00000523979 775 ntBASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 RNF126P1-202ENST00000569893 925 ntBASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRBV6-7A0A0A0MS04 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV6-7A0A0A0MS04 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV6-7A0A0A0MS04 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.46□□□□□ -0.1
TRBV6-7A0A0A0MS04 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
TRBV6-7A0A0A0MS04 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV6-7A0A0A0MS04 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV6-7A0A0A0MS04 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC007967.3-201ENST00000434308 558 ntBASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 AC005052.1-201ENST00000625181 2492 ntBASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV6-7A0A0A0MS04 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms