Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 MIR1909-201ENST00000411312 80 ntBASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 GIMAP3P-201ENST00000495150 836 ntBASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 AC087289.5-201ENST00000586076 3175 ntBASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 MIR346-201ENST00000362234 95 ntBASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 IGHV3-72-202ENST00000621503 303 ntBASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 WASH6P-202ENST00000359512 1437 ntBASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 AC046185.3-201ENST00000623228 1824 ntBASIC19.3■□□□□ 0.68
PTCH2Q9Y6C5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 AC109635.5-201ENST00000533593 962 ntBASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 AC084346.2-201ENST00000607097 949 ntBASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTCH2Q9Y6C5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.28■□□□□ 0.68
PTCH2Q9Y6C5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms