Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGA7Q9Y5G6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGA7Q9Y5G6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGA7Q9Y5G6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGA7Q9Y5G6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGA7Q9Y5G6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA7Q9Y5G6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHGA7Q9Y5G6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHGA7Q9Y5G6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHGA7Q9Y5G6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 AP005117.1-201ENST00000584346 1413 ntBASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 MIR940-201ENST00000401276 94 ntBASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 AC027601.4-201ENST00000611259 610 ntBASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 AC106886.4-201ENST00000623557 2502 ntBASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 HLA-J-201ENST00000462773 1622 ntBASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA7Q9Y5G6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 AGGF1P2-201ENST00000426656 2106 ntBASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 ABCD1P5-201ENST00000445663 754 ntBASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 MTCL1P1-201ENST00000446207 792 ntBASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 IGHV3-22-201ENST00000520721 359 ntBASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 AC125634.1-201ENST00000438758 1403 ntBASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA7Q9Y5G6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 AL591424.1-201ENST00000442569 1213 ntBASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 PGAM5P1-201ENST00000518923 814 ntBASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 AC021087.4-201ENST00000563761 564 ntBASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 FAM197Y3-203ENST00000618346 717 ntBASIC17.12■□□□□ 0.33
PCDHGA7Q9Y5G6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms