Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FNDC3AQ9Y2H6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 DDX43P3-201ENST00000441064 443 ntBASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 AC055717.3-201ENST00000622967 595 ntBASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 REXO1L11P-201ENST00000620964 1927 ntBASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.68■□□□□ 0.42
FNDC3AQ9Y2H6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 AL356309.3-201ENST00000624132 1934 ntBASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 OR7E14P-202ENST00000530490 1290 ntBASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 AC034105.1-201ENST00000563488 319 ntBASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 LINC00896-202ENST00000609602 2128 ntBASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 FAM197Y3-203ENST00000618346 717 ntBASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 BX276092.7-203ENST00000637198 1536 ntBASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FNDC3AQ9Y2H6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 AC010327.4-202ENST00000591484 748 ntBASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 AC025062.2-201ENST00000605477 670 ntBASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FNDC3AQ9Y2H6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms