Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NCKAP1Q9Y2A7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 PMS2P2-201ENST00000425039 1128 ntBASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 CEND1P1-201ENST00000451006 455 ntBASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 AC074386.1-202ENST00000463561 864 ntBASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 ALG1L5P-201ENST00000482043 771 ntBASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 OR7E47P-204ENST00000575924 449 ntBASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 AC025580.3-201ENST00000617932 1424 ntBASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCKAP1Q9Y2A7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 AC254562.1-201ENST00000417586 456 ntBASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 AL078644.1-201ENST00000609881 752 ntBASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 BICD1-207ENST00000551848 1962 ntBASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.27■□□□□ 0.36
NCKAP1Q9Y2A7 AC020916.1-201ENST00000587762 1774 ntBASIC17.27■□□□□ 0.35
NCKAP1Q9Y2A7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCKAP1Q9Y2A7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.27■□□□□ 0.35
NCKAP1Q9Y2A7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
NCKAP1Q9Y2A7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCKAP1Q9Y2A7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCKAP1Q9Y2A7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.27■□□□□ 0.35
NCKAP1Q9Y2A7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCKAP1Q9Y2A7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NCKAP1Q9Y2A7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCKAP1Q9Y2A7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms