Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMCC3Q9ULS5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMCC3Q9ULS5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMCC3Q9ULS5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.07■□□□□ 0.16
TMCC3Q9ULS5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMCC3Q9ULS5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMCC3Q9ULS5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMCC3Q9ULS5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.07■□□□□ 0.16
TMCC3Q9ULS5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMCC3Q9ULS5 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMCC3Q9ULS5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 MYCLP1-201ENST00000372451 1075 ntBASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 AC096633.1-201ENST00000422446 749 ntBASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.06■□□□□ 0.16
TMCC3Q9ULS5 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 AP003733.1-201ENST00000491725 852 ntBASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 ZNF444P1-201ENST00000559497 298 ntBASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 FLJ38576-201ENST00000623820 2459 ntBASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC3Q9ULS5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms