Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 KRT18P1-202ENST00000452408 1331 ntBASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 AC092068.3-201ENST00000587894 2016 ntBASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CNOT11Q9UKZ1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 RN7SL606P-201ENST00000472779 293 ntBASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 KRT18P56-201ENST00000507275 550 ntBASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 GUSBP12-201ENST00000513727 720 ntBASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 TPSP2-201ENST00000561760 610 ntBASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 AC092329.2-201ENST00000598402 547 ntBASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 AL592071.1-201ENST00000611956 408 ntBASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 IGHV3-41-201ENST00000613121 348 ntBASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 AC022898.2-201ENST00000616822 1312 ntBASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.61■□□□□ 0.25
CNOT11Q9UKZ1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 DRAXINP1-201ENST00000437611 948 ntBASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CNOT11Q9UKZ1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms