Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCDNQ9UBB6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCDNQ9UBB6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.08■□□□□ 0.33
NCDNQ9UBB6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NCDNQ9UBB6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCDNQ9UBB6 AL031598.1-201ENST00000561511 1773 ntBASIC17.08■□□□□ 0.33
NCDNQ9UBB6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 AC004233.3-201ENST00000607794 1269 ntBASIC17.08■□□□□ 0.32
NCDNQ9UBB6 ACTL9-202ENST00000612068 1252 ntBASIC17.08■□□□□ 0.32
NCDNQ9UBB6 AC009118.2-201ENST00000613275 655 ntBASIC17.08■□□□□ 0.32
NCDNQ9UBB6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.08■□□□□ 0.32
NCDNQ9UBB6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 AC008677.1-201ENST00000519230 1561 ntBASIC17.07■□□□□ 0.32
NCDNQ9UBB6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 AL135744.1-201ENST00000565098 629 ntBASIC17.07■□□□□ 0.32
NCDNQ9UBB6 STK25P1-201ENST00000585406 838 ntBASIC17.07■□□□□ 0.32
NCDNQ9UBB6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.07■□□□□ 0.32
NCDNQ9UBB6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 GPS2P2-201ENST00000430745 888 ntBASIC17.06■□□□□ 0.32
NCDNQ9UBB6 AC140658.5-201ENST00000438532 169 ntBASIC17.06■□□□□ 0.32
NCDNQ9UBB6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 MIR6080-201ENST00000617359 66 ntBASIC17.06■□□□□ 0.32
NCDNQ9UBB6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCDNQ9UBB6 AC007613.1-201ENST00000572811 2597 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 252.7 ms