Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 LINC00304-203ENST00000565008 1864 ntBASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRIT1Q9P2V4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 FAM185BP-201ENST00000443595 716 ntBASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 PAWRP1-201ENST00000451083 565 ntBASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 KRT18P28-201ENST00000453838 1332 ntBASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 AC008764.6-201ENST00000595909 2069 ntBASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LRIT1Q9P2V4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
LRIT1Q9P2V4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 AC006116.8-202ENST00000587620 1550 ntBASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 FAM58CP-201ENST00000435741 640 ntBASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 AL513480.1-201ENST00000451731 511 ntBASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 AC027796.2-201ENST00000575326 344 ntBASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 LYSMD4-203ENST00000378904 2122 ntBASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 NOC2LP2-201ENST00000407594 1944 ntBASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LRIT1Q9P2V4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms