Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 PCDH8P1-201ENST00000428983 2773 ntBASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
THUMPD1Q9NXG2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 KRT8P26-201ENST00000534154 1276 ntBASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 AC009533.2-201ENST00000543664 586 ntBASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 AC124947.2-201ENST00000547118 1133 ntBASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THUMPD1Q9NXG2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.27■□□□□ 0.19
THUMPD1Q9NXG2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 DUX4L26-201ENST00000489078 1255 ntBASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THUMPD1Q9NXG2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms