Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRDM9Q9NQV7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 AL031284.1-201ENST00000419297 478 ntBASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 LAGE3P1-201ENST00000425356 484 ntBASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 AC107918.4-202ENST00000641623 219 ntBASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 LINC02012-201ENST00000608206 1725 ntBASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.33■□□□□ 0.2
PRDM9Q9NQV7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 NCF1C-201ENST00000438382 1427 ntBASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 HNRNPDP1-201ENST00000439535 754 ntBASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 AC093909.1-201ENST00000504731 1122 ntBASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 AC108860.2-201ENST00000562760 2183 ntBASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 AC139887.3-201ENST00000568585 713 ntBASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.32■□□□□ 0.2
PRDM9Q9NQV7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRDM9Q9NQV7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms