Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
C12orf4Q9NQ89 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 MIR1238-201ENST00000408483 83 ntBASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 AL390955.1-201ENST00000428694 934 ntBASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 SEC1P-202ENST00000473944 940 ntBASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 AC116407.2-201ENST00000613639 860 ntBASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
C12orf4Q9NQ89 CICP14-201ENST00000629111 2732 ntBASIC15.08■□□□□ 0.01
C12orf4Q9NQ89 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.08■□□□□ 0.01
C12orf4Q9NQ89 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
C12orf4Q9NQ89 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
C12orf4Q9NQ89 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
C12orf4Q9NQ89 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.08■□□□□ 0.01
C12orf4Q9NQ89 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
C12orf4Q9NQ89 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.08■□□□□ 0
C12orf4Q9NQ89 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.08■□□□□ 0
C12orf4Q9NQ89 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.08■□□□□ 0
C12orf4Q9NQ89 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
C12orf4Q9NQ89 TSPY14P-201ENST00000303979 915 ntBASIC15.08■□□□□ 0
C12orf4Q9NQ89 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.08■□□□□ 0
C12orf4Q9NQ89 AL512604.3-201ENST00000569583 964 ntBASIC15.08■□□□□ 0
C12orf4Q9NQ89 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
C12orf4Q9NQ89 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.08■□□□□ 0
C12orf4Q9NQ89 AC092865.7-201ENST00000641832 219 ntBASIC15.08■□□□□ 0
C12orf4Q9NQ89 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.08■□□□□ 0
C12orf4Q9NQ89 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.08■□□□□ 0
C12orf4Q9NQ89 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.08■□□□□ 0
C12orf4Q9NQ89 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C12orf4Q9NQ89 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C12orf4Q9NQ89 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
C12orf4Q9NQ89 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C12orf4Q9NQ89 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C12orf4Q9NQ89 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.08■□□□□ 0
C12orf4Q9NQ89 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.08■□□□□ 0
C12orf4Q9NQ89 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms