Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMG20AQ9NP66 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMG20AQ9NP66 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.76■□□□□ 0.11
HMG20AQ9NP66 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.76■□□□□ 0.11
HMG20AQ9NP66 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.76■□□□□ 0.11
HMG20AQ9NP66 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMG20AQ9NP66 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.76■□□□□ 0.11
HMG20AQ9NP66 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMG20AQ9NP66 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMG20AQ9NP66 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.76■□□□□ 0.11
HMG20AQ9NP66 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMG20AQ9NP66 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HMG20AQ9NP66 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 CA15P1-201ENST00000481698 905 ntBASIC15.75■□□□□ 0.11
HMG20AQ9NP66 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.75■□□□□ 0.11
HMG20AQ9NP66 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.75■□□□□ 0.11
HMG20AQ9NP66 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 AL365203.3-201ENST00000609742 2057 ntBASIC15.74■□□□□ 0.11
HMG20AQ9NP66 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 AL023284.2-201ENST00000405850 579 ntBASIC15.74■□□□□ 0.11
HMG20AQ9NP66 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 Z99916.2-201ENST00000604037 246 ntBASIC15.74■□□□□ 0.11
HMG20AQ9NP66 AC026471.5-201ENST00000615068 467 ntBASIC15.74■□□□□ 0.11
HMG20AQ9NP66 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 AL662844.4-201ENST00000606367 2838 ntBASIC15.74■□□□□ 0.11
HMG20AQ9NP66 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.74■□□□□ 0.11
HMG20AQ9NP66 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms