Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SP110Q9HB58 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SP110Q9HB58 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SP110Q9HB58 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SP110Q9HB58 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SP110Q9HB58 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.7■□□□□ 0.42
SP110Q9HB58 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.7■□□□□ 0.42
SP110Q9HB58 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SP110Q9HB58 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.7■□□□□ 0.42
SP110Q9HB58 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SP110Q9HB58 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SP110Q9HB58 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.69■□□□□ 0.42
SP110Q9HB58 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP110Q9HB58 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SP110Q9HB58 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
SP110Q9HB58 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.69■□□□□ 0.42
SP110Q9HB58 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP110Q9HB58 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP110Q9HB58 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.69■□□□□ 0.42
SP110Q9HB58 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.69■□□□□ 0.42
SP110Q9HB58 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.69■□□□□ 0.42
SP110Q9HB58 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SP110Q9HB58 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP110Q9HB58 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SP110Q9HB58 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.69■□□□□ 0.42
SP110Q9HB58 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.69■□□□□ 0.42
SP110Q9HB58 FAM197Y8-203ENST00000450145 560 ntBASIC17.69■□□□□ 0.42
SP110Q9HB58 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.69■□□□□ 0.42
SP110Q9HB58 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SP110Q9HB58 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SP110Q9HB58 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP110Q9HB58 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SP110Q9HB58 NCF1C-201ENST00000438382 1427 ntBASIC17.69■□□□□ 0.42
SP110Q9HB58 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
SP110Q9HB58 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP110Q9HB58 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SP110Q9HB58 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SP110Q9HB58 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP110Q9HB58 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.69■□□□□ 0.42
SP110Q9HB58 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.69■□□□□ 0.42
SP110Q9HB58 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SP110Q9HB58 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.69■□□□□ 0.42
SP110Q9HB58 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
SP110Q9HB58 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.68■□□□□ 0.42
SP110Q9HB58 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SP110Q9HB58 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SP110Q9HB58 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SP110Q9HB58 LINC00982-205ENST00000420957 435 ntBASIC17.68■□□□□ 0.42
SP110Q9HB58 ACTG1P4-201ENST00000425123 1122 ntBASIC17.68■□□□□ 0.42
SP110Q9HB58 AF186996.4-201ENST00000467186 377 ntBASIC17.68■□□□□ 0.42
SP110Q9HB58 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.68■□□□□ 0.42
SP110Q9HB58 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.68■□□□□ 0.42
SP110Q9HB58 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.68■□□□□ 0.42
SP110Q9HB58 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.68■□□□□ 0.42
SP110Q9HB58 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.68■□□□□ 0.42
SP110Q9HB58 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.68■□□□□ 0.42
SP110Q9HB58 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.68■□□□□ 0.42
SP110Q9HB58 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SP110Q9HB58 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SP110Q9HB58 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.68■□□□□ 0.42
SP110Q9HB58 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SP110Q9HB58 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SP110Q9HB58 AC116353.5-201ENST00000638148 1699 ntBASIC17.67■□□□□ 0.42
SP110Q9HB58 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP110Q9HB58 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP110Q9HB58 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SP110Q9HB58 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SP110Q9HB58 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SP110Q9HB58 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP110Q9HB58 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP110Q9HB58 AC093525.9-201ENST00000624961 1746 ntBASIC17.67■□□□□ 0.42
SP110Q9HB58 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP110Q9HB58 AL645608.8-201ENST00000606034 2086 ntBASIC17.67■□□□□ 0.42
SP110Q9HB58 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.67■□□□□ 0.42
SP110Q9HB58 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP110Q9HB58 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SP110Q9HB58 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SP110Q9HB58 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP110Q9HB58 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SP110Q9HB58 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.67■□□□□ 0.42
SP110Q9HB58 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP110Q9HB58 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SP110Q9HB58 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SP110Q9HB58 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SP110Q9HB58 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SP110Q9HB58 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms