Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 MIR5100-201ENST00000579544 119 ntBASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRRC40Q9H9A6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 AC084018.2-201ENST00000613093 2607 ntBASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 SIGLEC30P-201ENST00000455569 941 ntBASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LRRC40Q9H9A6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 SPDYE21P-201ENST00000413323 827 ntBASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 ABCD1P5-201ENST00000445663 754 ntBASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 AC124947.2-201ENST00000547118 1133 ntBASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 AC092053.1-201ENST00000605787 1936 ntBASIC17.53■□□□□ 0.4
LRRC40Q9H9A6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC40Q9H9A6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC40Q9H9A6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LRRC40Q9H9A6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC40Q9H9A6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC40Q9H9A6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC40Q9H9A6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC40Q9H9A6 AC106886.4-201ENST00000623557 2502 ntBASIC17.52■□□□□ 0.4
LRRC40Q9H9A6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms