Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDCP1Q9H5V8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDCP1Q9H5V8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDCP1Q9H5V8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 MYCLP1-201ENST00000372451 1075 ntBASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 MIR940-201ENST00000401276 94 ntBASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 AC006557.2-201ENST00000592985 1240 ntBASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 AL671883.3-201ENST00000603274 991 ntBASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 AL589182.2-201ENST00000619332 1049 ntBASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
CDCP1Q9H5V8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 AC104109.2-201ENST00000602919 1418 ntBASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 RNA5SP415-201ENST00000517246 115 ntBASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 MIR1199-201ENST00000621445 119 ntBASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 AC009336.1-201ENST00000608941 1553 ntBASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDCP1Q9H5V8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 REXO1L11P-201ENST00000620964 1927 ntBASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 AC005104.2-201ENST00000427818 678 ntBASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 PMS2P1-201ENST00000431037 1228 ntBASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 KRT18P58-201ENST00000527480 1120 ntBASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.12■□□□□ 0.17
CDCP1Q9H5V8 AL356488.2-201ENST00000602755 427 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms