Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SIRT7-212ENST00000573367 711 ntTSL 225.68■■□□□ 1.78e-8■■□□□ 13.6
XRN2Q9H0D6 SIRT7-203ENST00000570367 685 ntTSL 224.66■■□□□ 1.548e-8■■□□□ 13.6
XRN2Q9H0D6 SIRT7-219ENST00000575360 754 ntTSL 324.56■■□□□ 1.528e-8■■□□□ 13.6
XRN2Q9H0D6 SIRT7-215ENST00000574495 920 ntTSL 224.37■■□□□ 1.498e-8■■□□□ 13.6
XRN2Q9H0D6 SIRT7-213ENST00000573576 465 ntTSL 321.63■■□□□ 1.058e-8■■□□□ 13.6
XRN2Q9H0D6 SIRT7-206ENST00000571832 2511 ntTSL 219.38■□□□□ 0.698e-8■■□□□ 13.6
XRN2Q9H0D6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.342e-8■■□□□ 13.6
XRN2Q9H0D6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.932e-8■■□□□ 13.6
XRN2Q9H0D6 TP73-AS1-210ENST00000637775 1455 ntBASIC20.65■□□□□ 0.92e-8■■□□□ 13.6
XRN2Q9H0D6 ARFGAP1-211ENST00000519531 1490 ntTSL 320.65■□□□□ 0.93e-16■■□□□ 13.6
XRN2Q9H0D6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.857e-15■■□□□ 13.6
XRN2Q9H0D6 TAF15-203ENST00000603393 1214 ntTSL 1 (best)19.03■□□□□ 0.647e-15■■□□□ 13.6
XRN2Q9H0D6 TAF15-214ENST00000605649 776 ntTSL 519.03■□□□□ 0.647e-15■■□□□ 13.6
XRN2Q9H0D6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.637e-15■■□□□ 13.6
XRN2Q9H0D6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.44■□□□□ 0.382e-8■■□□□ 13.6
XRN2Q9H0D6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.317e-15■■□□□ 13.6
XRN2Q9H0D6 ATP1B3-205ENST00000475483 734 ntTSL 316.86■□□□□ 0.296e-7■■□□□ 13.6
XRN2Q9H0D6 ZFAND5-208ENST00000488164 3020 ntTSL 515.89■□□□□ 0.132e-8■■□□□ 13.6
XRN2Q9H0D6 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.12e-8■■□□□ 13.6
XRN2Q9H0D6 DNHD1-205ENST00000477562 566 ntTSL 415.61■□□□□ 0.092e-8■■□□□ 13.6
XRN2Q9H0D6 DNHD1-204ENST00000473019 1842 ntTSL 215.32■□□□□ 0.042e-8■■□□□ 13.6
XRN2Q9H0D6 TP73-AS1-209ENST00000636630 2529 ntTSL 515.28■□□□□ 0.042e-8■■□□□ 13.6
XRN2Q9H0D6 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.026e-7■■□□□ 13.6
XRN2Q9H0D6 ATP1B3-204ENST00000466678 1708 ntTSL 315.14■□□□□ 0.016e-7■■□□□ 13.6
XRN2Q9H0D6 TP73-AS1-204ENST00000452079 6358 ntTSL 1 (best)15.09■□□□□ 0.012e-8■■□□□ 13.6
XRN2Q9H0D6 TP73-AS1-205ENST00000587071 737 ntTSL 414.64□□□□□ -0.072e-8■■□□□ 13.6
XRN2Q9H0D6 TAF15-213ENST00000605197 760 ntTSL 214.32□□□□□ -0.127e-15■■□□□ 13.6
XRN2Q9H0D6 TAF15-212ENST00000604879 808 ntTSL 514.32□□□□□ -0.127e-15■■□□□ 13.6
XRN2Q9H0D6 DNHD1-206ENST00000496802 581 ntTSL 414.14□□□□□ -0.152e-8■■□□□ 13.6
XRN2Q9H0D6 TP73-AS1-206ENST00000608600 597 ntTSL 514.01□□□□□ -0.172e-8■■□□□ 13.6
XRN2Q9H0D6 AC084337.2-202ENST00000640959 595 ntAPPRIS P5 TSL 4 BASIC13.92□□□□□ -0.182e-8■■□□□ 13.6
XRN2Q9H0D6 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.82□□□□□ -0.22e-8■■□□□ 13.6
XRN2Q9H0D6 CLCN7-205ENST00000563642 4184 ntTSL 213.44□□□□□ -0.262e-8■■□□□ 13.6
XRN2Q9H0D6 TP73-AS1-201ENST00000418088 3329 ntTSL 1 (best)12.64□□□□□ -0.392e-8■■□□□ 13.6
XRN2Q9H0D6 AC084337.2-201ENST00000639224 589 ntAPPRIS ALT2 TSL 412.5□□□□□ -0.412e-8■■□□□ 13.6
XRN2Q9H0D6 DNHD1-202ENST00000354685 3205 ntTSL 1 (best) BASIC11.09□□□□□ -0.632e-8■■□□□ 13.6
XRN2Q9H0D6 XPR1-202ENST00000367590 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.712e-8■■□□□ 13.6
XRN2Q9H0D6 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC8.41□□□□□ -1.066e-7■■□□□ 13.6
XRN2Q9H0D6 ATP1B3-203ENST00000465172 1951 ntTSL 27.91□□□□□ -1.146e-7■■□□□ 13.6
XRN2Q9H0D6 TAF15-201ENST00000603067 580 ntTSL 57.21□□□□□ -1.267e-15■■□□□ 13.6
XRN2Q9H0D6 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.582e-8■■□□□ 13.6
XRN2Q9H0D6 SMOX-206ENST00000457205 1669 ntTSL 518.94■□□□□ 0.622e-7■■□□□ 13.6
XRN2Q9H0D6 SMOX-211ENST00000494098 812 ntTSL 512.38□□□□□ -0.432e-7■■□□□ 13.6
XRN2Q9H0D6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.522e-6■■□□□ 13.6
XRN2Q9H0D6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.392e-6■■□□□ 13.6
XRN2Q9H0D6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.262e-6■■□□□ 13.6
XRN2Q9H0D6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.47■□□□□ 0.238e-10■■□□□ 13.6
XRN2Q9H0D6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.048e-10■■□□□ 13.6
XRN2Q9H0D6 SEPT9-222ENST00000589070 582 ntTSL 322.16■■□□□ 1.146e-7■■□□□ 13.6
XRN2Q9H0D6 SEPT9-240ENST00000591833 576 ntTSL 417.23■□□□□ 0.356e-7■■□□□ 13.6
XRN2Q9H0D6 DDX5-205ENST00000577922 996 ntTSL 525.44■■□□□ 1.664e-11■■□□□ 13.6
XRN2Q9H0D6 DDX5-228ENST00000584279 676 ntTSL 325.44■■□□□ 1.664e-11■■□□□ 13.6
XRN2Q9H0D6 DDX5-220ENST00000581806 576 ntTSL 418.75■□□□□ 0.594e-11■■□□□ 13.6
XRN2Q9H0D6 DDX5-219ENST00000581697 580 ntTSL 517.1■□□□□ 0.334e-11■■□□□ 13.6
XRN2Q9H0D6 DDX5-232ENST00000585111 1051 ntTSL 216.92■□□□□ 0.34e-11■■□□□ 13.6
XRN2Q9H0D6 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.6■□□□□ 0.254e-11■■□□□ 13.6
XRN2Q9H0D6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.164e-11■■□□□ 13.6
XRN2Q9H0D6 DDX5-207ENST00000578400 575 ntTSL 515.78■□□□□ 0.124e-11■■□□□ 13.6
XRN2Q9H0D6 DDX5-233ENST00000585223 699 ntTSL 212.86□□□□□ -0.354e-11■■□□□ 13.6
XRN2Q9H0D6 DDX5-218ENST00000581693 2156 ntTSL 511.97□□□□□ -0.494e-11■■□□□ 13.6
XRN2Q9H0D6 DDX5-203ENST00000540698 2225 ntTSL 511.66□□□□□ -0.544e-11■■□□□ 13.6
XRN2Q9H0D6 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC11.36□□□□□ -0.594e-11■■□□□ 13.6
XRN2Q9H0D6 DDX5-231ENST00000585060 572 ntTSL 410.63□□□□□ -0.714e-11■■□□□ 13.6
XRN2Q9H0D6 DDX5-215ENST00000581230 3558 ntTSL 27.57□□□□□ -1.24e-11■■□□□ 13.6
XRN2Q9H0D6 ATP2A1-202ENST00000395503 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.63e-6■■□□□ 13.6
XRN2Q9H0D6 ATP2A1-201ENST00000357084 3532 ntTSL 2 BASIC11.02□□□□□ -0.643e-6■■□□□ 13.6
XRN2Q9H0D6 ARHGEF1-210ENST00000594521 826 ntTSL 521.01■□□□□ 0.954e-8■■□□□ 13.6
XRN2Q9H0D6 ARHGEF1-218ENST00000599589 2636 ntTSL 1 (best)18.55■□□□□ 0.564e-8■■□□□ 13.6
XRN2Q9H0D6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.084e-8■■□□□ 13.6
XRN2Q9H0D6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.47■□□□□ 0.074e-8■■□□□ 13.6
XRN2Q9H0D6 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.094e-8■■□□□ 13.6
XRN2Q9H0D6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.38□□□□□ -0.114e-8■■□□□ 13.6
XRN2Q9H0D6 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.384e-8■■□□□ 13.6
XRN2Q9H0D6 ARHGEF1-220ENST00000600274 3439 ntTSL 1 (best)11.52□□□□□ -0.574e-8■■□□□ 13.6
XRN2Q9H0D6 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.892e-7■■□□□ 13.6
XRN2Q9H0D6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.144e-7■■□□□ 13.5
XRN2Q9H0D6 NRIP1-205ENST00000637630 573 ntTSL 314.34□□□□□ -0.114e-7■■□□□ 13.5
XRN2Q9H0D6 NRIP1-207ENST00000638122 543 ntTSL 1 (best)14.25□□□□□ -0.134e-7■■□□□ 13.5
XRN2Q9H0D6 NRIP1-206ENST00000637963 498 ntTSL 413.08□□□□□ -0.324e-7■■□□□ 13.5
XRN2Q9H0D6 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.74e-7■■□□□ 13.5
XRN2Q9H0D6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.634e-7■■□□□ 13.5
XRN2Q9H0D6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.148e-7■■□□□ 13.5
XRN2Q9H0D6 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.318e-7■■□□□ 13.5
XRN2Q9H0D6 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC10.54□□□□□ -0.721e-6■■□□□ 13.5
XRN2Q9H0D6 MYBBP1A-205ENST00000571368 1995 ntTSL 218.88■□□□□ 0.613e-6■■□□□ 13.5
XRN2Q9H0D6 MYBBP1A-210ENST00000574167 746 ntTSL 315.85■□□□□ 0.133e-6■■□□□ 13.5
XRN2Q9H0D6 MYBBP1A-212ENST00000574934 1941 ntTSL 215.24■□□□□ 0.033e-6■■□□□ 13.5
XRN2Q9H0D6 DUS1L-211ENST00000578907 1084 ntTSL 332.73■■■□□ 2.832e-7■■□□□ 13.5
XRN2Q9H0D6 DUS1L-215ENST00000582529 1212 ntTSL 531.44■■■□□ 2.622e-7■■□□□ 13.5
XRN2Q9H0D6 DUS1L-207ENST00000578176 937 ntTSL 531.01■■■□□ 2.552e-7■■□□□ 13.5
XRN2Q9H0D6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.92■■■□□ 2.542e-7■■□□□ 13.5
XRN2Q9H0D6 FOXA1-204ENST00000554607 789 ntTSL 329.79■■■□□ 2.362e-7■■□□□ 13.5
XRN2Q9H0D6 CDS2-204ENST00000467923 783 ntTSL 328.91■■■□□ 2.222e-7■■□□□ 13.5
XRN2Q9H0D6 CDS2-202ENST00000450570 945 ntTSL 325.15■■□□□ 1.622e-7■■□□□ 13.5
XRN2Q9H0D6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.7■■□□□ 1.542e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-221ENST00000550329 622 ntTSL 223.86■■□□□ 1.412e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-210ENST00000547510 924 ntTSL 523.77■■□□□ 1.42e-7■■□□□ 13.5
XRN2Q9H0D6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.242e-7■■□□□ 13.5
XRN2Q9H0D6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.242e-7■■□□□ 13.5
XRN2Q9H0D6 SLC11A2-222ENST00000550714 587 ntTSL 422.81■■□□□ 1.242e-7■■□□□ 13.5
Retrieved 100 of 21,068 protein–RNA pairs in 142.2 ms