Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.92■□□□□ 0.94
RPAP1Q9BWH6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 AC009336.1-201ENST00000608941 1553 ntBASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 YBX1P5-201ENST00000509441 847 ntBASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.91■□□□□ 0.94
RPAP1Q9BWH6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 STK19B-204ENST00000512515 211 ntBASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 AL139327.4-201ENST00000612362 153 ntBASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 AC106820.2-201ENST00000563775 3264 ntBASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 AC006504.4-201ENST00000592118 1568 ntBASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPAP1Q9BWH6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RPAP1Q9BWH6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
RPAP1Q9BWH6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
RPAP1Q9BWH6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.89■□□□□ 0.94
RPAP1Q9BWH6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.89■□□□□ 0.94
RPAP1Q9BWH6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.89■□□□□ 0.94
RPAP1Q9BWH6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RPAP1Q9BWH6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPAP1Q9BWH6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
RPAP1Q9BWH6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.89■□□□□ 0.94
RPAP1Q9BWH6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RPAP1Q9BWH6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPAP1Q9BWH6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 SLC25A1P3-201ENST00000395415 828 ntBASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 DNAJB3-202ENST00000449667 1266 ntBASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 IGHV3-65-201ENST00000523210 341 ntBASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 AC008667.4-201ENST00000607370 168 ntBASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms