Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC092068.3-201ENST00000587894 2016 ntBASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 AL592071.1-201ENST00000611956 408 ntBASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC078925.2-201ENST00000624013 1973 ntBASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 KRT8P10-201ENST00000450021 1447 ntBASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 AL645929.1-201ENST00000420084 975 ntBASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 TSPY22P-201ENST00000427496 604 ntBASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC011840.4-201ENST00000578471 627 ntBASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC083849.1-201ENST00000615227 514 ntBASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC124864.1-201ENST00000623408 392 ntBASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
SHANK2-AS3Q9BTD1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms