Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 AC116353.5-201ENST00000638148 1699 ntBASIC16.4■□□□□ 0.22
BBS4Q96RK4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.4■□□□□ 0.22
BBS4Q96RK4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
BBS4Q96RK4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.4■□□□□ 0.22
BBS4Q96RK4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.4■□□□□ 0.22
BBS4Q96RK4 NUS1P2-201ENST00000417358 873 ntBASIC16.4■□□□□ 0.22
BBS4Q96RK4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.4■□□□□ 0.22
BBS4Q96RK4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.4■□□□□ 0.22
BBS4Q96RK4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.4■□□□□ 0.22
BBS4Q96RK4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.4■□□□□ 0.22
BBS4Q96RK4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.4■□□□□ 0.22
BBS4Q96RK4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
BBS4Q96RK4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
BBS4Q96RK4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.4■□□□□ 0.22
BBS4Q96RK4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BBS4Q96RK4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
BBS4Q96RK4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
BBS4Q96RK4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
BBS4Q96RK4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
BBS4Q96RK4 AC009336.1-201ENST00000608941 1553 ntBASIC16.39■□□□□ 0.21
BBS4Q96RK4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
BBS4Q96RK4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.39■□□□□ 0.21
BBS4Q96RK4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.39■□□□□ 0.21
BBS4Q96RK4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.39■□□□□ 0.21
BBS4Q96RK4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.39■□□□□ 0.21
BBS4Q96RK4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.39■□□□□ 0.21
BBS4Q96RK4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 AD001527.2-201ENST00000622994 785 ntBASIC16.39■□□□□ 0.21
BBS4Q96RK4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.39■□□□□ 0.21
BBS4Q96RK4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
BBS4Q96RK4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
BBS4Q96RK4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 AC093525.9-201ENST00000624961 1746 ntBASIC16.39■□□□□ 0.21
BBS4Q96RK4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
BBS4Q96RK4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BBS4Q96RK4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 AC132938.5-201ENST00000624980 1813 ntBASIC16.38■□□□□ 0.21
BBS4Q96RK4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BBS4Q96RK4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BBS4Q96RK4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms