Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 AC106820.2-201ENST00000563775 3264 ntBASIC14.35□□□□□ -0.11
GAFA1Q96PS6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GAFA1Q96PS6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 AC006504.4-201ENST00000592118 1568 ntBASIC14.34□□□□□ -0.11
GAFA1Q96PS6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GAFA1Q96PS6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GAFA1Q96PS6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
GAFA1Q96PS6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GAFA1Q96PS6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.33□□□□□ -0.11
GAFA1Q96PS6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GAFA1Q96PS6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GAFA1Q96PS6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.33□□□□□ -0.11
GAFA1Q96PS6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GAFA1Q96PS6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GAFA1Q96PS6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GAFA1Q96PS6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 RPS2P28-201ENST00000314255 741 ntBASIC14.33□□□□□ -0.12
GAFA1Q96PS6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 AL031284.1-201ENST00000419297 478 ntBASIC14.33□□□□□ -0.12
GAFA1Q96PS6 KRT18P27-201ENST00000427733 1299 ntBASIC14.33□□□□□ -0.12
GAFA1Q96PS6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 SLC25A6P4-201ENST00000586535 553 ntBASIC14.33□□□□□ -0.12
GAFA1Q96PS6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 AC008735.5-201ENST00000623544 497 ntBASIC14.33□□□□□ -0.12
GAFA1Q96PS6 FAM215A-202ENST00000632077 792 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms