Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 BX276092.7-203ENST00000637198 1536 ntBASIC14.06□□□□□ -0.16
ZNF48Q96MX3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 MCCD1P2-201ENST00000423228 335 ntBASIC14.06□□□□□ -0.16
ZNF48Q96MX3 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.06□□□□□ -0.16
ZNF48Q96MX3 PMS2P2-201ENST00000425039 1128 ntBASIC14.06□□□□□ -0.16
ZNF48Q96MX3 VN2R19P-201ENST00000442399 1052 ntBASIC14.06□□□□□ -0.16
ZNF48Q96MX3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 DNAJB3-202ENST00000449667 1266 ntBASIC14.06□□□□□ -0.16
ZNF48Q96MX3 HCG4B-203ENST00000450128 991 ntBASIC14.06□□□□□ -0.16
ZNF48Q96MX3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 STK19B-204ENST00000512515 211 ntBASIC14.06□□□□□ -0.16
ZNF48Q96MX3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 AC008667.4-201ENST00000607370 168 ntBASIC14.06□□□□□ -0.16
ZNF48Q96MX3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 AC116407.2-201ENST00000613639 860 ntBASIC14.06□□□□□ -0.16
ZNF48Q96MX3 AC004790.2-201ENST00000623588 572 ntBASIC14.06□□□□□ -0.16
ZNF48Q96MX3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 AC211486.1-202ENST00000416371 468 ntBASIC14.05□□□□□ -0.16
ZNF48Q96MX3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 DDX43P3-201ENST00000441064 443 ntBASIC14.05□□□□□ -0.16
ZNF48Q96MX3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 ALG1L5P-201ENST00000482043 771 ntBASIC14.05□□□□□ -0.16
ZNF48Q96MX3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 AC211476.1-201ENST00000503899 468 ntBASIC14.05□□□□□ -0.16
ZNF48Q96MX3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 AC079781.4-201ENST00000641908 219 ntBASIC14.05□□□□□ -0.16
ZNF48Q96MX3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 AC005332.8-201ENST00000622750 2735 ntBASIC14.05□□□□□ -0.16
ZNF48Q96MX3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF48Q96MX3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 AL391005.1-201ENST00000623953 2435 ntBASIC14.04□□□□□ -0.16
ZNF48Q96MX3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ZNF48Q96MX3 NFIC-211ENST00000641145 8399 ntBASIC14.04□□□□□ -0.16
ZNF48Q96MX3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms