Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHAMP1Q96JM3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 LIN28AP1-201ENST00000429574 405 ntBASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 AC005336.2-201ENST00000593183 939 ntBASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 AL049757.1-201ENST00000616842 1596 ntBASIC20.04■□□□□ 0.8
CHAMP1Q96JM3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 AC005521.1-201ENST00000393351 872 ntBASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 ALOX12P2-203ENST00000570921 1945 ntBASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHAMP1Q96JM3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 KRT8P10-201ENST00000450021 1447 ntBASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 AC113347.1-201ENST00000413321 391 ntBASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 AC091607.1-201ENST00000490318 1060 ntBASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 AC083849.1-201ENST00000615227 514 ntBASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHAMP1Q96JM3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHAMP1Q96JM3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHAMP1Q96JM3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CHAMP1Q96JM3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.02■□□□□ 0.79
CHAMP1Q96JM3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHAMP1Q96JM3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHAMP1Q96JM3 AC005052.1-201ENST00000625181 2492 ntBASIC20.01■□□□□ 0.79
CHAMP1Q96JM3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms