Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHDQ96IW2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.3■□□□□ 0.36
SHDQ96IW2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.3■□□□□ 0.36
SHDQ96IW2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHDQ96IW2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHDQ96IW2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SHDQ96IW2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHDQ96IW2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHDQ96IW2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.3■□□□□ 0.36
SHDQ96IW2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHDQ96IW2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SHDQ96IW2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHDQ96IW2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.3■□□□□ 0.36
SHDQ96IW2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.3■□□□□ 0.36
SHDQ96IW2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SHDQ96IW2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHDQ96IW2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHDQ96IW2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHDQ96IW2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHDQ96IW2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.3■□□□□ 0.36
SHDQ96IW2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHDQ96IW2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.3■□□□□ 0.36
SHDQ96IW2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 AC135776.1-201ENST00000319817 2481 ntBASIC17.29■□□□□ 0.36
SHDQ96IW2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SHDQ96IW2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SHDQ96IW2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.29■□□□□ 0.36
SHDQ96IW2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.29■□□□□ 0.36
SHDQ96IW2 AC007274.1-201ENST00000439805 662 ntBASIC17.29■□□□□ 0.36
SHDQ96IW2 SERBP1P5-201ENST00000510079 1181 ntBASIC17.29■□□□□ 0.36
SHDQ96IW2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.29■□□□□ 0.36
SHDQ96IW2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.29■□□□□ 0.36
SHDQ96IW2 AL596325.1-201ENST00000563991 1082 ntBASIC17.29■□□□□ 0.36
SHDQ96IW2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.29■□□□□ 0.36
SHDQ96IW2 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.29■□□□□ 0.36
SHDQ96IW2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.29■□□□□ 0.36
SHDQ96IW2 SPDYE22P-201ENST00000582158 798 ntBASIC17.29■□□□□ 0.36
SHDQ96IW2 AC004233.3-201ENST00000607794 1269 ntBASIC17.29■□□□□ 0.36
SHDQ96IW2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.29■□□□□ 0.36
SHDQ96IW2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SHDQ96IW2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.29■□□□□ 0.36
SHDQ96IW2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SHDQ96IW2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.29■□□□□ 0.36
SHDQ96IW2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHDQ96IW2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.28■□□□□ 0.36
SHDQ96IW2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
SHDQ96IW2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SHDQ96IW2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
SHDQ96IW2 HCG4-201ENST00000418983 998 ntBASIC17.28■□□□□ 0.36
SHDQ96IW2 AC092580.3-201ENST00000430932 139 ntBASIC17.28■□□□□ 0.36
SHDQ96IW2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SHDQ96IW2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 AC004890.2-204ENST00000481968 304 ntBASIC17.28■□□□□ 0.36
SHDQ96IW2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.28■□□□□ 0.36
SHDQ96IW2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.28■□□□□ 0.36
SHDQ96IW2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.28■□□□□ 0.36
SHDQ96IW2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SHDQ96IW2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.28■□□□□ 0.36
SHDQ96IW2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SHDQ96IW2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.28■□□□□ 0.36
SHDQ96IW2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.28■□□□□ 0.36
SHDQ96IW2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.28■□□□□ 0.36
SHDQ96IW2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHDQ96IW2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHDQ96IW2 CROCCP3-202ENST00000420820 1947 ntBASIC17.27■□□□□ 0.36
SHDQ96IW2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.27■□□□□ 0.36
SHDQ96IW2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHDQ96IW2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
SHDQ96IW2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.27■□□□□ 0.36
SHDQ96IW2 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.27■□□□□ 0.36
SHDQ96IW2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SHDQ96IW2 AL353732.1-201ENST00000569618 1459 ntBASIC17.27■□□□□ 0.36
SHDQ96IW2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.27■□□□□ 0.36
SHDQ96IW2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SHDQ96IW2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHDQ96IW2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms