Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.52■□□□□ 0.88
DDX11Q96FC9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX11Q96FC9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX11Q96FC9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX11Q96FC9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
DDX11Q96FC9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX11Q96FC9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX11Q96FC9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX11Q96FC9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX11Q96FC9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX11Q96FC9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
DDX11Q96FC9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX11Q96FC9 AC005104.2-201ENST00000427818 678 ntBASIC20.52■□□□□ 0.88
DDX11Q96FC9 RPL13AP23-201ENST00000480739 586 ntBASIC20.52■□□□□ 0.88
DDX11Q96FC9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDX11Q96FC9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX11Q96FC9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDX11Q96FC9 MIR7706-201ENST00000613747 67 ntBASIC20.52■□□□□ 0.88
DDX11Q96FC9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.52■□□□□ 0.88
DDX11Q96FC9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX11Q96FC9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
DDX11Q96FC9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
DDX11Q96FC9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
DDX11Q96FC9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDX11Q96FC9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX11Q96FC9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX11Q96FC9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX11Q96FC9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDX11Q96FC9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.52■□□□□ 0.87
DDX11Q96FC9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
DDX11Q96FC9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
DDX11Q96FC9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
DDX11Q96FC9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
DDX11Q96FC9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX11Q96FC9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX11Q96FC9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX11Q96FC9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX11Q96FC9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX11Q96FC9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX11Q96FC9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX11Q96FC9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX11Q96FC9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX11Q96FC9 COX5BP2-201ENST00000392354 334 ntBASIC20.51■□□□□ 0.87
DDX11Q96FC9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX11Q96FC9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX11Q96FC9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX11Q96FC9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
DDX11Q96FC9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX11Q96FC9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX11Q96FC9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.5■□□□□ 0.87
DDX11Q96FC9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.5■□□□□ 0.87
DDX11Q96FC9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.5■□□□□ 0.87
DDX11Q96FC9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
DDX11Q96FC9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX11Q96FC9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX11Q96FC9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.5■□□□□ 0.87
DDX11Q96FC9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.5■□□□□ 0.87
DDX11Q96FC9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX11Q96FC9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.5■□□□□ 0.87
DDX11Q96FC9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX11Q96FC9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.5■□□□□ 0.87
DDX11Q96FC9 SART3-203ENST00000546611 1184 ntBASIC20.5■□□□□ 0.87
DDX11Q96FC9 AC021087.4-201ENST00000563761 564 ntBASIC20.5■□□□□ 0.87
DDX11Q96FC9 AC116407.3-201ENST00000623905 1129 ntBASIC20.5■□□□□ 0.87
DDX11Q96FC9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.5■□□□□ 0.87
DDX11Q96FC9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX11Q96FC9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX11Q96FC9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX11Q96FC9 AC097374.2-201ENST00000618617 1306 ntBASIC20.5■□□□□ 0.87
DDX11Q96FC9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDX11Q96FC9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX11Q96FC9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 ZNF259P1-201ENST00000407656 1365 ntBASIC20.49■□□□□ 0.87
DDX11Q96FC9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms