Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECHDC3Q96DC8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 VN2R19P-201ENST00000442399 1052 ntBASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 AL591424.1-201ENST00000442569 1213 ntBASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 KRT18P58-201ENST00000527480 1120 ntBASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 AC027601.4-201ENST00000611259 610 ntBASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECHDC3Q96DC8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ECHDC3Q96DC8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
ECHDC3Q96DC8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ECHDC3Q96DC8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 HCG4B-203ENST00000450128 991 ntBASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 SLC25A6P2-201ENST00000497974 877 ntBASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 AC140113.2-201ENST00000604370 208 ntBASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 HTR7P1-202ENST00000624664 4411 ntBASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ECHDC3Q96DC8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 AL645608.8-201ENST00000606034 2086 ntBASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 MIR4751-201ENST00000578027 74 ntBASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 FRMD8P1-201ENST00000440433 1524 ntBASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ECHDC3Q96DC8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms