Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 REXO1L6P-201ENST00000603433 1515 ntBASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 FUZ-207ENST00000526575 482 ntTSL 4 BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 AP005482.1-201ENST00000563722 1273 ntBASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 AL512343.1-201ENST00000605837 169 ntBASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 COX11-210ENST00000639671 696 ntBASIC22.68■■□□□ 1.22
COL22A1Q8NFW1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 ANKRD19P-201ENST00000338192 862 ntBASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 AC087499.6-201ENST00000411576 835 ntBASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC22.67■■□□□ 1.22
COL22A1Q8NFW1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 RPF1-202ENST00000370656 724 ntTSL 2 BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 RN7SL828P-201ENST00000607615 303 ntBASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL22A1Q8NFW1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 SPDYE19P-201ENST00000338590 713 ntBASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 AC234783.1-201ENST00000441761 496 ntBASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 AL589739.1-201ENST00000607720 493 ntBASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 AC099568.2-201ENST00000609194 695 ntBASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL22A1Q8NFW1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 MTND6P24-201ENST00000440466 518 ntBASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 AC092552.1-201ENST00000547243 906 ntBASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 AL079307.3-201ENST00000556114 283 ntBASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 AC008735.3-201ENST00000596646 500 ntBASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 AC135776.1-201ENST00000319817 2481 ntBASIC22.64■■□□□ 1.22
COL22A1Q8NFW1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms