Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 AC144831.1-201ENST00000573312 2656 ntBASIC12.95□□□□□ -0.34
NUP35Q8NFH5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 AL353807.1-201ENST00000427475 662 ntBASIC12.95□□□□□ -0.34
NUP35Q8NFH5 MFAP1P1-201ENST00000442257 1255 ntBASIC12.95□□□□□ -0.34
NUP35Q8NFH5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 AC110285.5-201ENST00000611501 352 ntBASIC12.95□□□□□ -0.34
NUP35Q8NFH5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 FSCN1P1-201ENST00000568912 1481 ntBASIC12.95□□□□□ -0.34
NUP35Q8NFH5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NUP35Q8NFH5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 AC010240.3-201ENST00000607688 395 ntBASIC12.94□□□□□ -0.34
NUP35Q8NFH5 AC124016.1-201ENST00000609552 612 ntBASIC12.94□□□□□ -0.34
NUP35Q8NFH5 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NUP35Q8NFH5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 AC126177.1-201ENST00000547829 2218 ntBASIC12.93□□□□□ -0.34
NUP35Q8NFH5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.93□□□□□ -0.34
NUP35Q8NFH5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NUP35Q8NFH5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms