Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPEB3Q8NE35 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 SIGLEC30P-201ENST00000455569 941 ntBASIC15.13■□□□□ 0.01
CPEB3Q8NE35 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 AC008608.2-201ENST00000606089 416 ntBASIC15.13■□□□□ 0.01
CPEB3Q8NE35 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPEB3Q8NE35 AC116353.5-201ENST00000638148 1699 ntBASIC15.12■□□□□ 0.01
CPEB3Q8NE35 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 AC012313.1-201ENST00000593393 3059 ntBASIC15.12■□□□□ 0.01
CPEB3Q8NE35 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 SAPCD2P3-201ENST00000455031 850 ntBASIC15.12■□□□□ 0.01
CPEB3Q8NE35 FGFR3P6-201ENST00000457012 610 ntBASIC15.12■□□□□ 0.01
CPEB3Q8NE35 BX005266.1-201ENST00000473402 457 ntBASIC15.12■□□□□ 0.01
CPEB3Q8NE35 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 NKAPP1-205ENST00000585790 367 ntBASIC15.12■□□□□ 0.01
CPEB3Q8NE35 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPEB3Q8NE35 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.11■□□□□ 0.01
CPEB3Q8NE35 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CPEB3Q8NE35 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms