Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SYNPOQ8N3V7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 AC067852.2-201ENST00000590513 2313 ntBASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 AC092474.2-201ENST00000424288 719 ntBASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 RNA5SP421-201ENST00000516864 134 ntBASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 ACTL9-202ENST00000612068 1252 ntBASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 AC006116.8-202ENST00000587620 1550 ntBASIC17.49■□□□□ 0.39
SYNPOQ8N3V7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 ADH5P3-201ENST00000433842 1137 ntBASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 AC109322.1-201ENST00000524499 1264 ntBASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 AC009093.7-201ENST00000623853 1223 ntBASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SYNPOQ8N3V7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SYNPOQ8N3V7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms