Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 AC026366.1-201ENST00000488803 879 ntBASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 AC116407.2-201ENST00000613639 860 ntBASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD2Q8IV50 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 LINC01311-201ENST00000565162 1445 ntBASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 AC013268.4-201ENST00000637413 2228 ntBASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 SLC25A1P3-201ENST00000395415 828 ntBASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 B3GAT3P1-201ENST00000471720 806 ntBASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 MIR3180-5-201ENST00000583743 153 ntBASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 AP000692.2-201ENST00000608391 879 ntBASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 MIR6786-201ENST00000616843 113 ntBASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYSMD2Q8IV50 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.18■□□□□ 0.02
LYSMD2Q8IV50 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms